RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CATSPERBQ9H7T0 1116 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 PLAC1Q9HBJ0 212 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 RASSF1Q9NS23 344 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 PCDHGB3Q9Y5G1 929 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 TARSL2A2RTX5 802 aaKnown RBP3.56□□□□□ -1.84
VBP1-204ENST00000625964 C17orf102A2RUQ5 167 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 BECN2A8MW95 431 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 RNMTO43148 476 aaKnown RBP3.56□□□□□ -1.84
VBP1-204ENST00000625964 ANP32CO43423 234 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 WEE2P0C1S8 567 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 ARSBP15848 533 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 CD72P21854 359 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 HOXA11P31270 313 aaPredicted RBP3.56□□□□□ -1.84
VBP1-204ENST00000625964 RFC1P35251 1148 aaPredicted RBP3.56□□□□□ -1.84
VBP1-204ENST00000625964 GJC1P36383 396 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 DPP6P42658 865 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 MTNR1AP48039 350 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 PPP3CCP48454 512 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 PKP1Q13835 747 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 SH2D4BQ5SQS7 431 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 OTUD1Q5VV17 481 aaPredicted RBP3.56□□□□□ -1.84
VBP1-204ENST00000625964 LDHAL6AQ6ZMR3 332 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 FBXL14Q8N1E6 418 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 GHDCQ8N2G8 530 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 RNFT2Q96EX2 444 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 URB1-AS1Q96HZ7 61 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 ZNF333Q96JL9 665 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 APOLD1Q96LR9 279 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 PYM1Q9BRP8 204 aaKnown RBP3.56□□□□□ -1.84
VBP1-204ENST00000625964 ISCA1Q9BUE6 129 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 KLHL31Q9H511 634 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 CXorf56Q9H5V9 222 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 NOD2Q9HC29 1040 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 HIF1ANQ9NWT6 349 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 MYO6Q9UM54 1294 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 SUFUQ9UMX1 484 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 MST1RQ04912 1400 aa3.56□□□□□ -1.84
VBP1-204ENST00000625964 A0A1B0GVT2 93 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 OR6C68A6NDL8 312 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 I6L893 689 aaPredicted RBP3.55□□□□□ -1.84
VBP1-204ENST00000625964 PEX12O00623 359 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 LIASO43766 372 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 IL1AP01583 271 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 MYZAPP0CAP1 466 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 PTPN9P43378 593 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 CDH12P55289 794 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 ZP1P60852 638 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 ROR2Q01974 943 aaKnown RBP3.55□□□□□ -1.84
VBP1-204ENST00000625964 TRAF1Q13077 416 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 SLC12A1Q13621 1099 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 ANKRD1Q15327 319 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 DUSP6Q16828 381 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 FBXO47Q5MNV8 452 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 TBC1D9BQ66K14 1250 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 DENND1BQ6P3S1 775 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 SERPINA11Q86U17 422 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 TRIM74Q86UV6 250 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 TRIM73Q86UV7 250 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 PALB2Q86YC2 1186 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 HERC6Q8IVU3 1022 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 BICD2Q8TD16 824 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 ATOH1Q92858 354 aaPredicted RBP3.55□□□□□ -1.84
VBP1-204ENST00000625964 NPLQ9BXD5 320 aaPredicted RBP3.55□□□□□ -1.84
VBP1-204ENST00000625964 LHPPQ9H008 270 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 PLK2Q9NYY3 685 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 GRHL1Q9NZI5 618 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 HDAC6Q9UBN7 1215 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 SEL1LQ9UBV2 794 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 CD207Q9UJ71 328 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 FZD10Q9ULW2 581 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 GDAQ9Y2T3 454 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 PTGDR2Q9Y5Y4 395 aa3.55□□□□□ -1.84
VBP1-204ENST00000625964 OR6C75A6NL08 312 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 MS4A18H0YCH9 400 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 HSPB6O14558 160 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 KLK10O43240 276 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 RGS14O43566 566 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 SPRY3O43610 288 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 CLDN7O95471 211 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 LCATP04180 440 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 YWHAQP27348 245 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 TNFRSF8P28908 595 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 HNF1BP35680 557 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 MLH1P40692 756 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 GPS2Q13227 327 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 KRT71Q3SY84 523 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 DNTTIP2Q5QJE6 756 aaKnown RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 FNBP1LQ5T0N5 605 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 GJB7Q6PEY0 223 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 Q6ZSV7 163 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 ZDHHC23Q8IYP9 409 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 SETD9Q8NE22 299 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 WFIKKN2Q8TEU8 576 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 SLC35F5Q8WV83 523 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 STAMQ92783 540 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 MIB2Q96AX9 1013 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 ZSCAN31Q96LW9 406 aaPredicted RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 DCLK3Q9C098 648 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 STN1Q9H668 368 aaKnown RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 TTC12Q9H892 705 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms