RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 PLPP6Q8IY26 295 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 PYROXD2Q8N2H3 581 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 PNPLA1Q8N8W4 532 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 GRIN3AQ8TCU5 1115 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 ISG20Q96AZ6 181 aaKnown RBP11.05□□□□□ -0.64
SSBP4-215ENST00000625926 EPAS1Q99814 870 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 FUCA2Q9BTY2 467 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 EDEM3Q9BZQ6 932 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 HAUS4Q9H6D7 363 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 ERVMER34-1Q9H9K5 563 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 TAS2R14Q9NYV8 317 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 KLK13Q9UKR3 277 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 FZD10Q9ULW2 581 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 NEU3Q9UQ49 428 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 BTBD3Q9Y2F9 522 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 FCF1Q9Y324 198 aaKnown RBP11.05□□□□□ -0.64
SSBP4-215ENST00000625926 MSRB2Q9Y3D2 182 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 WASF2Q9Y6W5 498 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 SPEGQ15772 3267 aa11.05□□□□□ -0.64
SSBP4-215ENST00000625926 PLXND1Q9Y4D7 1925 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 A0A1W2PQU0 124 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 SYCE3A1L190 88 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 ZSCAN5CA6NGD5 496 aaPredicted RBP11.04□□□□□ -0.64
SSBP4-215ENST00000625926 RNF103O00237 685 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 YKT6O15498 198 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 TNFSF14O43557 240 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 KDELR3O43731 214 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 CREB3O43889 395 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 PCDH8O95206 1070 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 CD160O95971 181 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 ITGAVP06756 1048 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 GZMAP12544 262 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 CCNHP51946 323 aaPredicted RBP11.04□□□□□ -0.64
SSBP4-215ENST00000625926 NEK3P51956 506 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 YBEYP58557 167 aaPredicted RBP11.04□□□□□ -0.64
SSBP4-215ENST00000625926 KLHL40Q2TBA0 621 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 PLEKHA7Q6IQ23 1121 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 FBXL19Q6PCT2 694 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 TMC6Q7Z403 805 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 HORMAD1Q86X24 394 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 ZNF354CQ86Y25 554 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 RYBPQ8N488 228 aaPredicted RBP11.04□□□□□ -0.64
SSBP4-215ENST00000625926 OXR1Q8N573 874 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 RTL3Q8N8U3 475 aaKnown RBP11.04□□□□□ -0.64
SSBP4-215ENST00000625926 GATA6Q92908 595 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 LRIG1Q96JA1 1093 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 CATSPERBQ9H7T0 1116 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 DONSONQ9NYP3 566 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 ACTL7AQ9Y615 435 aa11.04□□□□□ -0.64
SSBP4-215ENST00000625926 PCDH15Q96QU1 1955 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 ZZEF1O43149 2961 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 TMEM8BA6NDV4 472 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 WASH4PA8MWX3 477 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 SLC31A1O15431 190 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 BUB1O43683 1085 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 POP4O95707 220 aaKnown RBP11.03□□□□□ -0.64
SSBP4-215ENST00000625926 GSRP00390 522 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 FTLP02792 175 aaPredicted RBP11.03□□□□□ -0.64
SSBP4-215ENST00000625926 ATXN1LP0C7T5 689 aaKnown RBP11.03□□□□□ -0.64
SSBP4-215ENST00000625926 ADRB3P13945 408 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 PSMA2P25787 234 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 ITGB7P26010 798 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 PRKCIP41743 596 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 RXRGP48443 463 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 SNRPD1P62314 119 aaKnown RBP11.03□□□□□ -0.64
SSBP4-215ENST00000625926 OGDHQ02218 1023 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 KLHL30Q0D2K2 578 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 SHBQ15464 509 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 ZNF284Q2VY69 593 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 MYLK3Q32MK0 819 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 LEKR1Q6ZMV7 388 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 ZNF571Q7Z3V5 609 aaPredicted RBP11.03□□□□□ -0.64
SSBP4-215ENST00000625926 SPATS2Q86XZ4 545 aaKnown RBP11.03□□□□□ -0.64
SSBP4-215ENST00000625926 GATAD2AQ86YP4 633 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 KDF1Q8NAX2 398 aaPredicted RBP11.03□□□□□ -0.64
SSBP4-215ENST00000625926 OR2AP1Q8NGE2 309 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 SAP25Q8TEE9 199 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 CASKIN2Q8WXE0 1202 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 KLHDC7BQ96G42 594 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 FEM1CQ96JP0 617 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 TMEM121BQ9BXQ6 578 aaPredicted RBP11.03□□□□□ -0.64
SSBP4-215ENST00000625926 TM6SF2Q9BZW4 377 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 TTYH3Q9C0H2 523 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 ZDHHC6Q9H6R6 413 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 CBX8Q9HC52 389 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 GCN1Q92616 2671 aaKnown RBP11.03□□□□□ -0.64
SSBP4-215ENST00000625926 SPAG17Q6Q759 2223 aa11.03□□□□□ -0.64
SSBP4-215ENST00000625926 TMEM191CA6NGB0 347 aa11.02□□□□□ -0.65
SSBP4-215ENST00000625926 GOLGA8CPA6NN73 597 aa11.02□□□□□ -0.65
SSBP4-215ENST00000625926 EIF3CLB5ME19 914 aaKnown RBP11.02□□□□□ -0.65
SSBP4-215ENST00000625926 RASA4BC9J798 803 aa11.02□□□□□ -0.65
SSBP4-215ENST00000625926 KRIT1O00522 736 aa11.02□□□□□ -0.65
SSBP4-215ENST00000625926 DDX3XO00571 662 aaKnown RBP eCLIP11.02□□□□□ -0.651e-29■■■■□ 20
SSBP4-215ENST00000625926 FGF10O15520 208 aaPredicted RBP11.02□□□□□ -0.65
SSBP4-215ENST00000625926 RASA4O43374 803 aa11.02□□□□□ -0.65
SSBP4-215ENST00000625926 SKILP12757 684 aa11.02□□□□□ -0.65
SSBP4-215ENST00000625926 PRLRP16471 622 aa11.02□□□□□ -0.65
SSBP4-215ENST00000625926 HNRNPA2B1P22626 353 aaKnown RBP11.02□□□□□ -0.65
SSBP4-215ENST00000625926 EPHA8P29322 1005 aaPredicted RBP11.02□□□□□ -0.65
SSBP4-215ENST00000625926 AKT2P31751 481 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms