RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 ARCQ7LC44 396 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 APTXQ7Z2E3 356 aaKnown RBP6.57□□□□□ -1.36
TCF4-249ENST00000625716 FAM124AQ86V42 546 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 CIR1Q86X95 450 aaPredicted RBP6.57□□□□□ -1.36
TCF4-249ENST00000625716 PHF13Q86YI8 300 aaPredicted RBP6.57□□□□□ -1.36
TCF4-249ENST00000625716 EMC1Q8N766 993 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 KDM1BQ8NB78 822 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 UBASH3BQ8TF42 649 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 RXFP2Q8WXD0 754 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 TCEAL3Q969E4 200 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 IGSF8Q969P0 613 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 NT5C3BQ969T7 300 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 MYEOVQ96EZ4 313 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 TOE1Q96GM8 510 aaKnown RBP6.57□□□□□ -1.36
TCF4-249ENST00000625716 C1orf74Q96LT6 269 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 HSPA12BQ96MM6 686 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 PRMT1Q99873 361 aaKnown RBP6.57□□□□□ -1.36
TCF4-249ENST00000625716 EDEM2Q9BV94 578 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 GPR174Q9BXC1 333 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 BTBD1Q9H0C5 482 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 HSD3B7Q9H2F3 369 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 TMEM245Q9H330 911 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 TMEM9BQ9NQ34 198 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 PRSS16Q9NQE7 514 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 DLL3Q9NYJ7 618 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 WSB2Q9NYS7 404 aaPredicted RBP6.57□□□□□ -1.36
TCF4-249ENST00000625716 SUSD2Q9UGT4 822 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 TMEM59LQ9UK28 342 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 VPS28Q9UK41 221 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 SCML1Q9UN30 329 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 ATG2BQ96BY7 2078 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 MYOFQ9NZM1 2061 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 ATXN2Q99700 1313 aaKnown RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 LRRC53A6NM62 1247 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 SIGLEC16A6NMB1 481 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 C4orf47A7E2U8 309 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 TTC34A8MYJ7 566 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 PATE3B3GLJ2 98 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 IGLV1-40P01703 118 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 PDGFAP04085 211 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 TPM3P06753 285 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 SYPP08247 313 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 SERPINF2P08697 491 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 UNGP13051 313 aaPredicted RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 TFE3P19532 575 aaPredicted RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 GPD1P21695 349 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 MZF1P28698 734 aaPredicted RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 OR1E1P30953 314 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 PTPN9P43378 593 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 NUMBP49757 651 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 PLK1P53350 603 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 UBASH3AP57075 661 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 RPS14P62263 151 aaKnown RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 IRX4P78413 519 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 FANCCQ00597 558 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 IQCB1Q15051 598 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 HNRNPA1L2Q32P51 320 aaKnown RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 CCDC14Q49A88 953 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 DCAF12L1Q5VU92 463 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 ACAD10Q6JQN1 1059 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 SCYL2Q6P3W7 929 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 DCUN1D2Q6PH85 259 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 SLC23A3Q6PIS1 610 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 ZNF438Q7Z4V0 828 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 DSG4Q86SJ6 1040 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 C14orf80Q86SX3 495 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 LUZP1Q86V48 1076 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 FAM131BQ86XD5 332 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 KRTAP1-3Q8IUG1 177 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 APCDD1Q8J025 514 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 C3orf20Q8ND61 904 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 CADM4Q8NFZ8 388 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 SNX19Q92543 992 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 ZNF419Q96HQ0 510 aaPredicted RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 LMLNQ96KR4 655 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 RPL10LQ96L21 214 aaKnown RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 CCDC114Q96M63 670 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 NAP1L5Q96NT1 182 aaPredicted RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 HAPLN3Q96S86 360 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 PCDHB18PQ96TA0 734 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 OMDQ99983 421 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 FEM1AQ9BSK4 669 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 EDEM3Q9BZQ6 932 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 ZYG11BQ9C0D3 744 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 MIR1-1HGQ9H1L0 117 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 RSPH9Q9H1X1 276 aaPredicted RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 SGK2Q9HBY8 427 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 CBX8Q9HC52 389 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 CD248Q9HCU0 757 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 USP36Q9P275 1121 aaKnown RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 STOML1Q9UBI4 398 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 EVLQ9UI08 416 aaPredicted RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 SLCO3A1Q9UIG8 710 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 PILRBQ9UKJ0 227 aa6.56□□□□□ -1.36
TCF4-249ENST00000625716 INTS6Q9UL03 887 aaKnown RBP6.56□□□□□ -1.36
TCF4-249ENST00000625716 ITIH6Q6UXX5 1313 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 LNP1A1A4G5 178 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 FAM47DPA6NHR8 397 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 C2CD4BA6NLJ0 364 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 DRGXA6NNA5 263 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms