RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 DCAF4L2Q8NA75 395 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 ZNF248Q8NDW4 579 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 ZNF548Q8NEK5 533 aaPredicted RBP11.28□□□□□ -0.6
DDX41-218ENST00000625286 TTC9Q92623 222 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 PPP1R9BQ96SB3 815 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 TBCBQ99426 244 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 LGMNQ99538 433 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 SLC17A9Q9BYT1 436 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 TCEAL2Q9H3H9 227 aaPredicted RBP11.28□□□□□ -0.6
DDX41-218ENST00000625286 WDCPQ9H6R7 721 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 POLR1BQ9H9Y6 1135 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 DNAJC28Q9NX36 388 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 APEX2Q9UBZ4 518 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 IL36AQ9UHA7 158 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 FADS3Q9Y5Q0 445 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 HS3ST3A1Q9Y663 406 aa11.28□□□□□ -0.6
DDX41-218ENST00000625286 AHCTF1Q8WYP5 2266 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 PYCARD-AS1I3L0S3 204 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 GCATO75600 419 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 PRNPP04156 253 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 GP1BAP07359 652 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 ADRB3P13945 408 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 NME1P15531 152 aaKnown RBP11.27□□□□□ -0.61
DDX41-218ENST00000625286 FLT3P36888 993 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 ABL2P42684 1182 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 PCBP4P57723 403 aaKnown RBP11.27□□□□□ -0.61
DDX41-218ENST00000625286 KRT83P78385 493 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 SKOR1P84550 965 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 EIF2B5Q13144 721 aaKnown RBP11.27□□□□□ -0.61
DDX41-218ENST00000625286 MAPK8IP2Q13387 824 aaPredicted RBP11.27□□□□□ -0.61
DDX41-218ENST00000625286 LY6DQ14210 128 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 CDKN3Q16667 212 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 ISXQ2M1V0 245 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 PERM1Q5SV97 790 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 GUSBP11Q6P575 273 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 NYAP1Q6ZVC0 841 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 SETD3Q86TU7 594 aaPredicted RBP11.27□□□□□ -0.61
DDX41-218ENST00000625286 IFI44Q8TCB0 444 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 PGAP3Q96FM1 320 aaPredicted RBP11.27□□□□□ -0.61
DDX41-218ENST00000625286 IFT43Q96FT9 208 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 ATXN7L3BQ96GX2 97 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 C1orf74Q96LT6 269 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDX41-218ENST00000625286 C2orf49Q9BVC5 232 aaPredicted RBP11.27□□□□□ -0.61
DDX41-218ENST00000625286 C1QTNF2Q9BXJ5 285 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 NDFIP2Q9NV92 336 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDX41-218ENST00000625286 SATB2Q9UPW6 733 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 ITM2BQ9Y287 266 aa11.27□□□□□ -0.61
DDX41-218ENST00000625286 FCF1Q9Y324 198 aaKnown RBP11.27□□□□□ -0.61
DDX41-218ENST00000625286 HECTD1Q9ULT8 2610 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 NAV2Q8IVL1 2488 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 IGLON5A6NGN9 336 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 A6NNZ2 444 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 ERVH48-1M5A8F1 160 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 EFSO43281 561 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 SRGAP2O75044 1071 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 ITGB7P26010 798 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 OR1E1P30953 314 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 L1CAMP32004 1257 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 ACVRL1P37023 503 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 GABRB2P47870 512 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 SULT1E1P49888 294 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 CLCN6P51797 869 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 PDX1P52945 283 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 ERVPABLB-1P60509 514 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 RPS21P63220 83 aaKnown RBP11.26□□□□□ -0.61
DDX41-218ENST00000625286 DEFB133Q30KQ1 61 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 BRMS1LQ5PSV4 323 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 CRTC1Q6UUV9 634 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 KYAT3Q6YP21 454 aaKnown RBP11.26□□□□□ -0.61
DDX41-218ENST00000625286 GBP6Q6ZN66 633 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 PARS2Q7L3T8 475 aaKnown RBP11.26□□□□□ -0.61
DDX41-218ENST00000625286 PTAR1Q7Z6K3 402 aaPredicted RBP11.26□□□□□ -0.61
DDX41-218ENST00000625286 XYLT1Q86Y38 959 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 FAM71AQ8IYT1 594 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 RBFAQ8N0V3 343 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 MAPK15Q8TD08 544 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 SNRNP27Q8WVK2 155 aaKnown RBP11.26□□□□□ -0.61
DDX41-218ENST00000625286 VCPIP1Q96JH7 1222 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 SLC46A1Q96NT5 459 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 DEPDC7Q96QD5 511 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 SPON2Q9BUD6 331 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 HOOK1Q9UJC3 728 aaKnown RBP11.26□□□□□ -0.61
DDX41-218ENST00000625286 TMEM59LQ9UK28 342 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 DNAJC12Q9UKB3 198 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 FARP1Q9Y4F1 1045 aaPredicted RBP11.26□□□□□ -0.61
DDX41-218ENST00000625286 ENTPD2Q9Y5L3 495 aa11.26□□□□□ -0.61
DDX41-218ENST00000625286 ILVBLA1L0T0 632 aa11.25□□□□□ -0.61
DDX41-218ENST00000625286 CPED1A4D0V7 1026 aa11.25□□□□□ -0.61
DDX41-218ENST00000625286 EME2A4GXA9 379 aaPredicted RBP11.25□□□□□ -0.61
DDX41-218ENST00000625286 NEMP2A6NFY4 417 aa11.25□□□□□ -0.61
DDX41-218ENST00000625286 KLK10O43240 276 aa11.25□□□□□ -0.61
DDX41-218ENST00000625286 ITIH2P19823 946 aa11.25□□□□□ -0.61
DDX41-218ENST00000625286 CDH5P33151 784 aaPredicted RBP11.25□□□□□ -0.61
DDX41-218ENST00000625286 KRT9P35527 623 aa11.25□□□□□ -0.61
DDX41-218ENST00000625286 SERPINH1P50454 418 aaKnown RBP11.25□□□□□ -0.61
DDX41-218ENST00000625286 CCNHP51946 323 aaPredicted RBP11.25□□□□□ -0.61
DDX41-218ENST00000625286 NEK3P51956 506 aa11.25□□□□□ -0.61
DDX41-218ENST00000625286 PFN3P60673 137 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms