RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MAGEC3Q8TD91 643 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 BCL7CQ8WUZ0 217 aaPredicted RBP20■□□□□ 0.79
PCDHB11-202ENST00000624887 IMP4Q96G21 291 aaKnown RBP20■□□□□ 0.79
PCDHB11-202ENST00000624887 WWP1Q9H0M0 922 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 RHOJQ9H4E5 214 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 CAB39LQ9H9S4 337 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 NOD2Q9HC29 1040 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 ZNF358Q9NW07 568 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 BAIAP2L1Q9UHR4 511 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 SCN5AQ14524 2016 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 MYLKQ15746 1914 aa20■□□□□ 0.79
PCDHB11-202ENST00000624887 CHUKO15111 745 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 C2P06681 752 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 HMBSP08397 361 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 GRK2P25098 689 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 GMPRP36959 345 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 ARCN1P48444 511 aaKnown RBP19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 CSRP3P50461 194 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 WNT3AP56704 352 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 KRT72Q14CN4 511 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 MARC1Q5VT66 337 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 TEX26Q8N6G2 289 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 SIKE1Q9BRV8 207 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 UBE2OQ9C0C9 1292 aaKnown RBP19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 ARNT2Q9HBZ2 717 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 CDY1Q9Y6F8 540 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 TLR5O60602 858 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 PQBP1O60828 265 aaKnown RBP19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 KITP10721 976 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 CPA3P15088 417 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 PTPN4P29074 926 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 SLC1A6P48664 564 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 KPNA1P52294 538 aaPredicted RBP19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 TNK2Q07912 1038 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 MTA1Q13330 715 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 GRM3Q14832 879 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 DLG2Q15700 870 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 UGP2Q16851 508 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 ESRP1Q6NXG1 681 aaKnown RBP19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 PRSS55Q6UWB4 352 aaPredicted RBP19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 LRRC43Q8N309 656 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 ACVR1CQ8NER5 493 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 SCLYQ96I15 445 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 TTLL2Q9BWV7 592 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 CCSER2Q9H7U1 834 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 SP110Q9HB58 689 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 NT5MQ9NPB1 228 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 VPS45Q9NRW7 570 aa19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 MARCOQ9UEW3 520 aaPredicted RBP19.99■□□□□ 0.79
PCDHB11-202ENST00000624887 E2F8A0AVK6 867 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 SLC38A8A6NNN8 435 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 FCHO1O14526 889 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 ITM2AO43736 263 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 VAPBO95292 243 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 CXCL10P02778 98 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 ATF6P18850 670 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 ARNTP27540 789 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 MNAT1P51948 309 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 AQP5P55064 265 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 SLC10A7Q0GE19 358 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 FBXO22Q8NEZ5 403 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 OR6Y1Q8NGX8 325 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 PIWIL2Q8TC59 973 aaKnown RBP19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 GIPC2Q8TF65 315 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 PSMG2Q969U7 264 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 PTCD3Q96EY7 689 aaKnown RBP19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 PRR11Q96HE9 360 aaPredicted RBP19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 RPRD1AQ96P16 312 aaPredicted RBP19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 TACO1Q9BSH4 297 aaKnown RBP19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 TBC1D10AQ9BXI6 508 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 PRKD2Q9BZL6 878 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 ATP13A1Q9HD20 1204 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 TREX1Q9NSU2 369 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 ARL8BQ9NVJ2 186 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 TANC1Q9C0D5 1861 aa19.98■□□□□ 0.79
PCDHB11-202ENST00000624887 SIN3BO75182 1162 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 AHSGP02765 367 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 ATP5BP06576 529 aaKnown RBP19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 PAMP19021 973 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 GABRB3P28472 473 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 IRF9Q00978 393 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 PARP15Q460N3 678 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 TTC7BQ86TV6 843 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 ALYREFQ86V81 257 aaKnown RBP19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 PABPC5Q96DU9 382 aaKnown RBP19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 NSL1Q96IY1 281 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 CEP295NLQ96MC4 621 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 KLHL5Q96PQ7 755 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 NMUR2Q9GZQ4 415 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 ATXN3LQ9H3M9 355 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 SLC39A10Q9ULF5 831 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 MIA3Q5JRA6 1907 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 RAMP2O60895 175 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 LYPLA1O75608 230 aaPredicted RBP19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 RALBP11234 206 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 CHRNA4P43681 627 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 POLD3Q15054 466 aaPredicted RBP19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 CNGA3Q16281 694 aa19.97■□□□□ 0.79
PCDHB11-202ENST00000624887 PCSK7Q16549 785 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms