RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 ZKSCAN4Q969J2 545 aaPredicted RBP4.41□□□□□ -1.7
ATRX-209ENST00000623242 TBC1D20Q96BZ9 403 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 GRAMD1AQ96CP6 724 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 AK8Q96MA6 479 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 LENG8Q96PV6 779 aaPredicted RBP4.41□□□□□ -1.7
ATRX-209ENST00000623242 BPIFA3Q9BQP9 254 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 TP63Q9H3D4 680 aaPredicted RBP4.41□□□□□ -1.7
ATRX-209ENST00000623242 LY9Q9HBG7 655 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 CYP4F11Q9HBI6 524 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 TRIM36Q9NQ86 728 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 ARHGEF3Q9NR81 526 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 SERTAD4Q9NUC0 356 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 PCDHA7Q9UN72 937 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 CCDC88AQ3V6T2 1871 aa4.41□□□□□ -1.7
ATRX-209ENST00000623242 AK9Q5TCS8 1911 aa4.4□□□□□ -1.7
ATRX-209ENST00000623242 DOCK2Q92608 1830 aa4.4□□□□□ -1.7
ATRX-209ENST00000623242 A0A1B0GVL5 298 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 H0YIZ8 118 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 AP4M1O00189 453 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 PES1O00541 588 aaKnown RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 FCHO1O14526 889 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 IKBKBO14920 756 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 CREB3O43889 395 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 NMT2O60551 498 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 URI1O94763 535 aaPredicted RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 WDR47O94967 919 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 NXPH3O95157 252 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 TTLL1O95922 423 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 ONECUT2O95948 504 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 C6P13671 934 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 MCM7P33993 719 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 GRIA3P42263 894 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 HUNKP57058 714 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 MYL5Q02045 173 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 ABHD18Q0P651 414 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 ZNF169Q14929 603 aaPredicted RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 NONOQ15233 471 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATRX-209ENST00000623242 ZRSR2Q15696 482 aaKnown RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 TMEM95Q3KNT9 176 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 AASDHQ4L235 1098 aaPredicted RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 C4orf46Q504U0 113 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 TMEM196Q5HYL7 178 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 CCDC70Q6NSX1 233 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 MSANTD2Q6P1R3 559 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 PIK3AP1Q6ZUJ8 805 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 STOX1Q6ZVD7 989 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 STXBP4Q6ZWJ1 553 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 MOB2Q70IA6 237 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 CYB5R4Q7L1T6 521 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 ZNF551Q7Z340 670 aaPredicted RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 GATAD2AQ86YP4 633 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 CREBRFQ8IUR6 639 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 BLIDQ8IZY5 108 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 FSTL5Q8N475 847 aaPredicted RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 SCAMP5Q8TAC9 235 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 NOC3LQ8WTT2 800 aaKnown RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 TRAPPC12Q8WVT3 735 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 CCT6BQ92526 530 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 CAVIN3Q969G5 261 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 MCRS1Q96EZ8 462 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 PRR11Q96HE9 360 aaPredicted RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 GSDMAQ96QA5 445 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 TSG101Q99816 390 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 THAP7Q9BT49 309 aaPredicted RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 MYLK2Q9H1R3 596 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 DUSP22Q9NRW4 184 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 STEAP1Q9UHE8 339 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 PGAP2Q9UHJ9 254 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 ST3GAL5Q9UNP4 418 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.4□□□□□ -1.712e-6■■■□□ 16.8
ATRX-209ENST00000623242 SRPRBQ9Y5M8 271 aaKnown RBP4.4□□□□□ -1.71
ATRX-209ENST00000623242 HS3ST3A1Q9Y663 406 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 ZHX2Q9Y6X8 837 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 MYH2Q9UKX2 1941 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 ADAMTSL1Q8N6G6 1762 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 ROBO3Q96MS0 1386 aa4.4□□□□□ -1.71
ATRX-209ENST00000623242 SBF1O95248 1867 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 DICER1Q9UPY3 1922 aaKnown RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 COL2A1P02458 1487 aaPredicted RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 WDR90Q96KV7 1748 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 FAM90A18PA6NE21 464 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 FAM90A16PA6NEW6 464 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 FAM90A9PA6NNJ1 464 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 FAM90A5PA8MXJ8 464 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 KLRF2D3W0D1 207 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 M0QZQ0 153 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 PSMA7O14818 248 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 ZNF500O60304 480 aaPredicted RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 LARGE1O95461 756 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 FAM90A15PP0C7V4 464 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 FAM90A14PP0C7W9 464 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 EEF2P13639 858 aaKnown RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 PFKFB1P16118 471 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 GCFC2P16383 781 aaKnown RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 ENGP17813 658 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 RXRAP19793 462 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 PROZP22891 400 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 MARCKSP29966 332 aaPredicted RBP4.39□□□□□ -1.71
ATRX-209ENST00000623242 CYP2C18P33260 490 aa4.39□□□□□ -1.71
ATRX-209ENST00000623242 STAT6P42226 847 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms