RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 CCDC173Q0VFZ6 552 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 SGCGQ13326 291 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 FGL2Q14314 439 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 CDO1Q16878 200 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 ARL13BQ3SXY8 428 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 RAB6CQ53S08 254 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 NAA35Q5VZE5 725 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 TRNP1Q6NT89 227 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 ZNF783Q6ZMS7 281 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 LEKR1Q6ZMV7 388 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 ABI3BPQ7Z7G0 1075 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 NOP9Q86U38 636 aaKnown RBP9.5□□□□□ -0.89
TARDBP-227ENST00000622057 DCP2Q8IU60 420 aaKnown RBP9.5□□□□□ -0.89
TARDBP-227ENST00000622057 SLC22A18ASQ8N1D0 253 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 CACTIN-AS1Q8N1I8 211 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 PCDH20Q8N6Y1 951 aaKnown RBP9.5□□□□□ -0.89
TARDBP-227ENST00000622057 DCBLD1Q8N8Z6 715 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 FAM174AQ8TBP5 190 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 RFFLQ8WZ73 363 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 NAF1Q96HR8 494 aaKnown RBP9.5□□□□□ -0.89
TARDBP-227ENST00000622057 APOLD1Q96LR9 279 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 UBL7Q96S82 380 aaPredicted RBP9.5□□□□□ -0.89
TARDBP-227ENST00000622057 STK33Q9BYT3 514 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 TM6SF2Q9BZW4 377 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 CEP44Q9C0F1 390 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 RAB6CQ9H0N0 254 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 ABCG4Q9H172 646 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 PRORYQ9H606 182 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 ZDHHC6Q9H6R6 413 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 SAMSN1Q9NSI8 373 aaKnown RBP9.5□□□□□ -0.89
TARDBP-227ENST00000622057 TMEM51Q9NW97 253 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 HECAQ9UBI9 543 aaPredicted RBP9.5□□□□□ -0.89
TARDBP-227ENST00000622057 DNAI1Q9UI46 699 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 TMEM59LQ9UK28 342 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 PCDHB1Q9Y5F3 818 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 FADS3Q9Y5Q0 445 aa9.5□□□□□ -0.89
TARDBP-227ENST00000622057 COL5A1P20908 1838 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-227ENST00000622057 IGLON5A6NGN9 336 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 K7ESM1 405 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 NEMP1O14524 444 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 FPGTO14772 594 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 SCAMP1O15126 338 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 GFPT2O94808 682 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 CD160O95971 181 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 PRB1P04280 392 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 MPOP05164 745 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 ITGB7P26010 798 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 ERCC5P28715 1186 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-227ENST00000622057 DUSP3P51452 185 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-227ENST00000622057 PDE1CQ14123 709 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-227ENST00000622057 FZD2Q14332 565 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 C15orf59Q2T9L4 293 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-227ENST00000622057 DPCR1Q3MIW9 517 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 TMEM259Q4ZIN3 620 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 ARTNQ5T4W7 220 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 KIAA1161Q6NSJ0 714 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 PARS2Q7L3T8 475 aaKnown RBP9.49□□□□□ -0.89
TARDBP-227ENST00000622057 ZNF354CQ86Y25 554 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 OR6K2Q8NGY2 324 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 SNIP1Q8TAD8 396 aaKnown RBP9.49□□□□□ -0.89
TARDBP-227ENST00000622057 RXFP2Q8WXD0 754 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 SLC39A7Q92504 469 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 IFT43Q96FT9 208 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 FCRL3Q96P31 734 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-227ENST00000622057 DUSP23Q9BVJ7 150 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 NAA15Q9BXJ9 866 aaKnown RBP9.49□□□□□ -0.89
TARDBP-227ENST00000622057 MAGEB5Q9BZ81 275 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 NDFIP2Q9NV92 336 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 NLGN3Q9NZ94 848 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 PPARGC1AQ9UBK2 798 aaKnown RBP9.49□□□□□ -0.89
TARDBP-227ENST00000622057 ZNF212Q9UDV6 495 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 OR12D3Q9UGF7 316 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 ATRXP46100 2492 aa9.49□□□□□ -0.89
TARDBP-227ENST00000622057 KNTC1P50748 2209 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 SMG1Q96Q15 3661 aaKnown RBP9.48□□□□□ -0.89
TARDBP-227ENST00000622057 APC2O95996 2303 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 ACACAQ13085 2346 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 ANKRD11Q6UB99 2663 aaPredicted RBP9.48□□□□□ -0.89
TARDBP-227ENST00000622057 CPED1A4D0V7 1026 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 C16orf96A6NNT2 1141 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 FAM72CH0Y354 149 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 H3BM21 787 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 KRIT1O00522 736 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 OPA1O60313 960 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 USP12O75317 370 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 GJB6O95452 261 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 LSM8O95777 96 aaKnown RBP9.48□□□□□ -0.89
TARDBP-227ENST00000622057 CSF2P04141 144 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 JUNDP17535 347 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 SDC4P31431 198 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 ADRA1BP35368 520 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 ABL2P42684 1182 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 RABIFP47224 123 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 NOMO3P69849 1222 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 CXADRP78310 365 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 C19orf57Q0VDD7 668 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 POLD3Q15054 466 aaPredicted RBP9.48□□□□□ -0.89
TARDBP-227ENST00000622057 TBC1D25Q3MII6 688 aa9.48□□□□□ -0.89
TARDBP-227ENST00000622057 CCDC14Q49A88 953 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms