RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 ELOA2Q8IYF1 753 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-225ENST00000621715 TTC9Q92623 222 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 DEPDC7Q96QD5 511 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 TBCBQ99426 244 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 C2orf49Q9BVC5 232 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-225ENST00000621715 RAB6CQ9H0N0 254 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 TCEAL2Q9H3H9 227 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-225ENST00000621715 POLR1BQ9H9Y6 1135 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 APEX2Q9UBZ4 518 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 SATB2Q9UPW6 733 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 ITM2BQ9Y287 266 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 SSUH2Q9Y2M2 353 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 FADS3Q9Y5Q0 445 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 COL12A1Q99715 3063 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 IGLV3-10A0A075B6K4 115 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 A6NNZ2 444 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 ERVH48-1M5A8F1 160 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 LZTS3O60299 673 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-225ENST00000621715 GADD45BO75293 160 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-225ENST00000621715 GNA14O95837 355 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 PRNPP04156 253 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 GP1BAP07359 652 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 ADRB3P13945 408 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 NME1P15531 152 aaKnown RBP17.08■□□□□ 0.32
TARDBP-225ENST00000621715 PON1P27169 355 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 PPP1R2P41236 205 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 ABL2P42684 1182 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 KRT83P78385 493 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 ISXQ2M1V0 245 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 C2CD6Q53TS8 623 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 KYAT3Q6YP21 454 aaKnown RBP17.08■□□□□ 0.32
TARDBP-225ENST00000621715 PARS2Q7L3T8 475 aaKnown RBP17.08■□□□□ 0.32
TARDBP-225ENST00000621715 ZNF397Q8NF99 534 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-225ENST00000621715 ATXN7L3BQ96GX2 97 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 VCPIP1Q96JH7 1222 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 PPP1R9BQ96SB3 815 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 SLC17A9Q9BYT1 436 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 WDCPQ9H6R7 721 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 FCF1Q9Y324 198 aaKnown RBP17.08■□□□□ 0.32
TARDBP-225ENST00000621715 HECTD1Q9ULT8 2610 aa17.08■□□□□ 0.32
TARDBP-225ENST00000621715 SPTY2D1-AS1A0A0U1RR47 76 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 FOXN3O00409 490 aaPredicted RBP17.07■□□□□ 0.32
TARDBP-225ENST00000621715 KLK10O43240 276 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 CSF2P04141 144 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 SULT1E1P49888 294 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 PDX1P52945 283 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 SKOR1P84550 965 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 EIF2B5Q13144 721 aaKnown RBP17.07■□□□□ 0.32
TARDBP-225ENST00000621715 DEFB133Q30KQ1 61 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 C3orf38Q5JPI3 329 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 PERM1Q5SV97 790 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 SETD3Q86TU7 594 aaPredicted RBP17.07■□□□□ 0.32
TARDBP-225ENST00000621715 RBFAQ8N0V3 343 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 OR6K2Q8NGY2 324 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 MAPK15Q8TD08 544 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 IFT43Q96FT9 208 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 NDFIP2Q9NV92 336 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
TARDBP-225ENST00000621715 ENTPD2Q9Y5L3 495 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 HS3ST3A1Q9Y663 406 aa17.07■□□□□ 0.32
TARDBP-225ENST00000621715 LRRK1Q38SD2 2015 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 CPED1A4D0V7 1026 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 IGLON5A6NGN9 336 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 GCATO75600 419 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 ITGB7P26010 798 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 OR1E1P30953 314 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 FLT3P36888 993 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 SERPINH1P50454 418 aaKnown RBP17.06■□□□□ 0.32
TARDBP-225ENST00000621715 CLCN6P51797 869 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 CCNHP51946 323 aaPredicted RBP17.06■□□□□ 0.32
TARDBP-225ENST00000621715 NEK3P51956 506 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 TMPRSS3P57727 454 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 ERVPABLB-1P60509 514 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 TAF1BQ53T94 588 aaPredicted RBP17.06■□□□□ 0.32
TARDBP-225ENST00000621715 BRMS1LQ5PSV4 323 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 NYAP1Q6ZVC0 841 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 EFL1Q7Z2Z2 1120 aaKnown RBP17.06■□□□□ 0.32
TARDBP-225ENST00000621715 BNIPLQ7Z465 357 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 KCNE4Q8WWG9 221 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 PGAP3Q96FM1 320 aaPredicted RBP17.06■□□□□ 0.32
TARDBP-225ENST00000621715 SPON2Q9BUD6 331 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 MAGEB5Q9BZ81 275 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 DYRK4Q9NR20 520 aa17.06■□□□□ 0.32
TARDBP-225ENST00000621715 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.06■□□□□ 0.32
TARDBP-225ENST00000621715 FARP1Q9Y4F1 1045 aaPredicted RBP17.06■□□□□ 0.32
TARDBP-225ENST00000621715 SRGAP2O75044 1071 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 ALPPL2P10696 532 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 L1CAMP32004 1257 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 ACVRL1P37023 503 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 HNRNPKP61978 463 aaKnown RBP eCLIP17.05■□□□□ 0.32
TARDBP-225ENST00000621715 RPS21P63220 83 aaKnown RBP17.05■□□□□ 0.32
TARDBP-225ENST00000621715 DEUP1Q05D60 604 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 PDE1CQ14123 709 aaPredicted RBP17.05■□□□□ 0.32
TARDBP-225ENST00000621715 HS1BP3Q53T59 392 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 KIAA1614Q5VZ46 1190 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 ZCCHC8Q6NZY4 707 aaKnown RBP17.05■□□□□ 0.32
TARDBP-225ENST00000621715 GBP6Q6ZN66 633 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 PARGQ86W56 976 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 XYLT1Q86Y38 959 aa17.05■□□□□ 0.32
TARDBP-225ENST00000621715 CREBRFQ8IUR6 639 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms