RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 ACOX2Q99424 681 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 B3GNT5Q9BYG0 378 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 PRDM12Q9H4Q4 367 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 DNAJC28Q9NX36 388 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CRYL1Q9Y2S2 319 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 MAFBQ9Y5Q3 323 aaPredicted RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CLDN5O00501 218 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 PEX1O43933 1283 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 B4GALT4O60513 344 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 KATNA1O75449 491 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TPSB2P20231 275 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CLK1P49759 484 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TGM3Q08188 693 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 STARD3Q14849 445 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TPSAB1Q15661 275 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 PIGZQ86VD9 579 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 B3GALNT2Q8NCR0 500 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 RBM15BQ8NDT2 890 aaKnown RBP8.45□□□□□ -1.06
ALMS1-208ENST00000620466 RDH11Q8TC12 318 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 TFAP2BQ92481 460 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 NDNQ99608 321 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 CLPBQ9H078 707 aa8.45□□□□□ -1.06
ALMS1-208ENST00000620466 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 PGM3O95394 542 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SLC2A4P14672 509 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 TNNI3P19429 210 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 EPHA3P29320 983 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 FMO4P31512 558 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 RENBPP51606 427 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 CCNG1P51959 295 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 NUP107P57740 925 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 RAB10P61026 200 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 MSLNQ13421 630 aaPredicted RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 FRG1Q14331 258 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 LRRC8DQ7L1W4 858 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 LUZP2Q86TE4 346 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 C10orf82Q8WW14 230 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 HSFY1Q96LI6 401 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 RTKNQ9BST9 563 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SDCBP2Q9H190 292 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 UTP6Q9NYH9 597 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 PCDHGA4Q9Y5G9 962 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 MYPNQ86TC9 1320 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 BCLAF3A2AJT9 711 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 CBX4O00257 560 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 TRIM38O00635 465 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 KPNA6O60684 536 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 PSEN2P49810 448 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SERPINH1P50454 418 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SCNN1BP51168 640 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 FNDC3BQ53EP0 1204 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SLC44A4Q53GD3 710 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 ZNF280DQ6N043 979 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 P3H2Q8IVL5 708 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 PLD5Q8N7P1 536 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 BANPQ8N9N5 519 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 FNDC5Q8NAU1 212 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 OSCP1Q8WVF1 389 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 MTG1Q9BT17 334 aaPredicted RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 DCUN1D5Q9BTE7 237 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SLC4A5Q9BY07 1137 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 CADM1Q9BY67 442 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 NIFKQ9BYG3 293 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 CIPCQ9C0C6 399 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 GBA2Q9HCG7 927 aaPredicted RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 ZNF112Q9UJU3 913 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 IFRD1O00458 451 aaPredicted RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 VPS4BO75351 444 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 ITGALP20701 1170 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 PSME3P61289 254 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 DRICH1Q6PGQ1 229 aaPredicted RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 VN1R5Q7Z5H4 357 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 P2RY11Q96G91 374 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SENP8Q96LD8 212 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SERPINB11Q96P15 392 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 TMEM39AQ9NV64 488 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 LNPEPQ9UIQ6 1025 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 KLHL20Q9Y2M5 609 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 MYH6P13533 1939 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 A0A1B0GW55 424 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 CLOCKO15516 846 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 CCNT2O60583 730 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 CFHP08603 1231 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 DUX4L2P0CJ85 424 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 DUX4L3P0CJ86 424 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 DUX4L4P0CJ87 422 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 DUX4L5P0CJ88 424 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 DUX4L6P0CJ89 424 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 DUX4L7P0CJ90 424 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 GRM5P41594 1212 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 MATKP42679 507 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 ENPEPQ07075 957 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 PPIDQ08752 370 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 CSTF3Q12996 717 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 ACOX1Q15067 660 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 NR6A1Q15406 480 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 FAM98BQ52LJ0 330 aaKnown RBP8.44□□□□□ -1.06
ALMS1-208ENST00000620466 TLK2Q86UE8 772 aa8.44□□□□□ -1.06
ALMS1-208ENST00000620466 SLCO2A1Q92959 643 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms