RNA–Protein interactions for RNA: ENST00000619053.1

AP001059.3-201, humanhuman

BASIC

Gene AP001059.3, Length 235 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001059.3-201ENST00000619053 PCDHGA12O60330 932 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 CBFA2T3O75081 653 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 LEFTY1O75610 366 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 SKILP12757 684 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 CCT8P50990 548 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 SIM1P81133 766 aaPredicted RBP16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 ZBED6P86452 979 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 TRIP6Q15654 476 aaKnown RBP16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 ARSIQ5FYB1 569 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 KCNT1Q5JUK3 1230 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 HGSNATQ68CP4 663 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 ERN2Q76MJ5 926 aaKnown RBP16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 IQCHQ86VS3 1027 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 PSTKQ8IV42 348 aaKnown RBP16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 UMODL1-AS1Q8N2C9 162 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 MFSD2AQ8NA29 543 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 CASKIN2Q8WXE0 1202 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 LRIG1Q96JA1 1093 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 SERAC1Q96JX3 654 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 CNTNAP3BQ96NU0 1288 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 CNTNAP3Q9BZ76 1288 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 MRPL47Q9HD33 250 aaKnown RBP16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 AASDHPPTQ9NRN7 309 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 CNOT8Q9UFF9 292 aaKnown RBP16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 PCOLCE2Q9UKZ9 415 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 CAPN11Q9UMQ6 739 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 PCDHB9Q9Y5E1 797 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 LRRK1Q38SD2 2015 aa16.68■□□□□ 0.26
AP001059.3-201ENST00000619053 CACNA1BQ00975 2339 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 H0Y8X5 98 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 ATMINO43313 823 aaPredicted RBP16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 CREB3O43889 395 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 RNGTTO60942 597 aaKnown RBP16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 RNF8O76064 485 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 TRIM16O95361 564 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 GSRP00390 522 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 WNT1P04628 370 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 ITGB7P26010 798 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 CCNHP51946 323 aaPredicted RBP16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 FAM193AP78312 1265 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 OVGP1Q12889 678 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 ACAP1Q15027 740 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 PARP15Q460N3 678 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 SETMARQ53H47 684 aaPredicted RBP16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 INO80DQ53TQ3 878 aaPredicted RBP16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 ERMARDQ5T6L9 678 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 LAYNQ6UX15 382 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 VPS36Q86VN1 386 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 BAHD1Q8TBE0 780 aaPredicted RBP16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 ZNF653Q96CK0 615 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 CAMK1GQ96NX5 476 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 AP4E1Q9UPM8 1137 aa16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 FCF1Q9Y324 198 aaKnown RBP16.67■□□□□ 0.26
AP001059.3-201ENST00000619053 PLXNB3Q9ULL4 1909 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 KNTC1P50748 2209 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 SHROOM3Q8TF72 1996 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 A0A1B0GTQ1 180 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 PRAMEF26H0Y7S4 382 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 WNT9AO14904 365 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 YKT6O15498 198 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 MAGEC1O60732 1142 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 SERPING1P05155 500 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 NEK3P51956 506 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 ZNF135P52742 658 aaPredicted RBP16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 TPI1P60174 286 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 SNRPD1P62314 119 aaKnown RBP16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 FOXC1Q12948 553 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 SERINC3Q13530 473 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 TDRD12Q587J7 1177 aaKnown RBP16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 ZSCAN30Q86W11 494 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 ARFGAP1Q8N6T3 406 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 OR2AP1Q8NGE2 309 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 GRIN3AQ8TCU5 1115 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 CDC6Q99741 560 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 ERVMER34-1Q9H9K5 563 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 IFNKQ9P0W0 207 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 ACTL7AQ9Y615 435 aa16.66■□□□□ 0.26
AP001059.3-201ENST00000619053 GOLGA4Q13439 2230 aaKnown RBP16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 RASA4BC9J798 803 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 TLR4O00206 839 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 RNF103O00237 685 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 RASA4O43374 803 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 AP1G1O43747 822 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 POP4O95707 220 aaKnown RBP16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 DNA2P51530 1060 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 NDST2P52849 883 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 HORMAD1Q86X24 394 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 DNAAF5Q86Y56 855 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 OXR1Q8N573 874 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 SETD7Q8WTS6 366 aaKnown RBP16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 ELF4Q99607 663 aaPredicted RBP16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 SNRNP25Q9BV90 132 aaKnown RBP16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 OSBPL1AQ9BXW6 950 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 TM6SF2Q9BZW4 377 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 LRRC19Q9H756 370 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 GDF3Q9NR23 364 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 LUC7L2Q9Y383 392 aaKnown RBP16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 AKAP13Q12802 2813 aa16.65■□□□□ 0.26
AP001059.3-201ENST00000619053 KMT2BQ9UMN6 2715 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms