RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 A0A1W2PQF6 199 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 MACROD2A1Z1Q3 448 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 TCAF2A6NFQ2 919 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ERICH4A6NGS2 130 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 UPK3BL1B0FP48 263 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 UPK3BL2E5RIL1 263 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 H3BQF6 201 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 MYO1CO00159 1063 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 RNF103O00237 685 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ENC1O14682 589 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 DCLK1O15075 740 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ALOX15BO15296 676 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 CREB3O43889 395 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 PRPSAP2O60256 369 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF821O75541 412 aaPredicted RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ZMPSTE24O75844 475 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 EPN2O95208 641 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 KLF8O95600 359 aaPredicted RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 CD160O95971 181 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 MT-CO1P00395 513 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 HLA-EP13747 358 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 RHOQP17081 205 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 POLR2EP19388 210 aaKnown RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 AMPD1P23109 780 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 PRKCHP24723 683 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 TIE1P35590 1138 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 GJC1P36383 396 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 P2RY2P41231 377 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 IL12RB1P42701 662 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 STK19P49842 368 aaPredicted RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 CDH4P55283 916 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 GEMIN4P57678 1058 aaKnown RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 CORO7P57737 925 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ST8SIA6P61647 398 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ADCY2Q08462 1091 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 SLC14A1Q13336 389 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 HNRNPDQ14103 355 aaKnown RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 DPYSL3Q14195 570 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ACAP1Q15027 740 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 DPYSL2Q16555 572 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 TAZQ16635 292 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 PLEKHG6Q3KR16 790 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 PITRM1Q5JRX3 1037 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 EFHC2Q5JST6 749 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 WDR45BQ5MNZ6 344 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 PLA2G2CQ5R387 149 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ERMARDQ5T6L9 678 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 TMCO4Q5TGY1 634 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 PEAR1Q5VY43 1037 aaPredicted RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 AFMIDQ63HM1 303 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 MBLAC2Q68D91 279 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 KIAA1211LQ6NV74 962 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 RWDD4Q6NW29 188 aaKnown RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 TSSK4Q6SA08 328 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 LRRC31Q6UY01 552 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 USP30Q70CQ3 517 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 LPCAT2Q7L5N7 544 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 POLNQ7Z5Q5 900 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 DSG4Q86SJ6 1040 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 SETD3Q86TU7 594 aaPredicted RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 MFN1Q8IWA4 741 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ARHGAP12Q8IWW6 846 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 PLPP6Q8IY26 295 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 RASGEF1CQ8N431 466 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 NPWQ8N729 165 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 PQLC3Q8N755 202 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF366Q8N895 744 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 RTL3Q8N8U3 475 aaKnown RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 TXNDC5Q8NBS9 432 aaKnown RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 FAM174AQ8TBP5 190 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 TEKT4Q8WW24 435 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 HSPH1Q92598 858 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 TBC1D31Q96DN5 1066 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 CSPG4P5Q96PW8 444 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 HERPUD2Q9BSE4 406 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 FEM1AQ9BSK4 669 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 TLR10Q9BXR5 811 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ZYG11BQ9C0D3 744 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 STMN4Q9H169 189 aaPredicted RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 SLC6A17Q9H1V8 727 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 FAM114A2Q9NRY5 505 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 TMEM248Q9NWD8 314 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 CACNA2D2Q9NY47 1150 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 DLL3Q9NYJ7 618 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 PPARGC1AQ9UBK2 798 aaKnown RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 FEZ2Q9UHY8 353 aaPredicted RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 SLCO3A1Q9UIG8 710 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 RRP15Q9Y3B9 282 aaKnown RBP5.36□□□□□ -1.55
SHMT1-211ENST00000618902 RAD54BQ9Y620 910 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 ALG6Q9Y672 507 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 CAPN6Q9Y6Q1 641 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 PLXND1Q9Y4D7 1925 aa5.36□□□□□ -1.55
SHMT1-211ENST00000618902 DMXL2Q8TDJ6 3036 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 PCNX2A6NKB5 2137 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ILVBLA1L0T0 632 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 BCLAF3A2AJT9 711 aaKnown RBP5.35□□□□□ -1.55
SHMT1-211ENST00000618902 FAM187AA6NFU0 413 aa5.35□□□□□ -1.55
SHMT1-211ENST00000618902 ZSCAN5CA6NGD5 496 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms