RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PTCD2Q8WV60 388 aaKnown RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF560Q96MR9 790 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 PLIN3O60664 434 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 WDR45BQ5MNZ6 344 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 CLYBLQ8N0X4 340 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 TSEN2Q8NCE0 465 aaKnown RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 FAM167AQ96KS9 214 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 ETNK2Q9NVF9 386 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 SAMHD1Q9Y3Z3 626 aaKnown RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 ZMYM2Q9UBW7 1377 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 MAST1Q9Y2H9 1570 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 MSH4O15457 936 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 MAGEB2O15479 319 aa15.19■□□□□ 0.02
COL5A1-208ENST00000618395 DNAJC14Q6Y2X3 702 aaPredicted RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 PCDH20Q8N6Y1 951 aaKnown RBP15.19■□□□□ 0.02
COL5A1-208ENST00000618395 LACTB2Q53H82 288 aaPredicted RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 TIPINQ9BVW5 301 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 A8MUI8 341 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 C1orf196B1AJZ1 125 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 TRDMT1O14717 391 aaKnown RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 SLC30A4O14863 429 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 KMOO15229 486 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 TCTEX1D2Q8WW35 142 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 RTKNQ9BST9 563 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 MTMR10Q9NXD2 777 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 BARHL2Q9NY43 387 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 TAS2R3Q9NYW6 316 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 EME2A4GXA9 379 aaPredicted RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 EFCAB9A8MZ26 197 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 PEPDP12955 493 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 CYP4B1P13584 511 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 PORP16435 677 aaPredicted RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 KLHL35Q6PF15 583 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF574Q6ZN55 896 aaPredicted RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 ASCC1Q8N9N2 400 aaKnown RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 LPCAT1Q8NF37 534 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 KAT2AQ92830 837 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 QPCTLQ9NXS2 382 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 FAM237BA0A1B0GVD1 139 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 ASB14A6NK59 587 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 BCKDKO14874 412 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 NELFEP18615 380 aaKnown RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 RGS19P49795 217 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 CSHL1Q14406 222 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 KCTD8Q6ZWB6 473 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 ARCQ7LC44 396 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 ELMOD1Q8N336 334 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 LEMD2Q8NC56 503 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 OXER1Q8TDS5 423 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 NEK6Q9HC98 313 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 AXIN2Q9Y2T1 843 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 HSPB11Q9Y547 144 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 FABP12A6NFH5 140 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 ZW10O43264 779 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 PLATP00750 562 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 AZGP1P25311 298 aaKnown RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 RPA4Q13156 261 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 GRB14Q14449 540 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 HERC6Q8IVU3 1022 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 TRMT2AQ8IZ69 625 aaKnown RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 EIF2AK1Q9BQI3 630 aaKnown RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 CAPN10Q9HC96 672 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 KCNE2Q9Y6J6 123 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 RP2O75695 350 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 MT-CO1P00395 513 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 CYP11B2P19099 503 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 GRK5P34947 590 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 RPL21P46778 160 aaKnown RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 RPS8P62241 208 aaKnown RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF548Q8NEK5 533 aaPredicted RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 DCPSQ96C86 337 aaKnown RBP15.18■□□□□ 0.02
COL5A1-208ENST00000618395 LXNQ9BS40 222 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 TRIM2Q9C040 744 aa15.18■□□□□ 0.02
COL5A1-208ENST00000618395 PMPCBO75439 489 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ACADSBP45954 432 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ELP6Q0PNE2 266 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 PDIA5Q14554 519 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 KLHDC7AQ5VTJ3 777 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 CYP2U1Q7Z449 544 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 MAB21L3Q8N8X9 362 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 NODALQ96S42 347 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 RIT2Q99578 217 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 PVALBP20472 110 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-208ENST00000618395 RPL35P42766 123 aaKnown RBP15.17■□□□□ 0.02
COL5A1-208ENST00000618395 DCDC1P59894 354 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 PDK2Q15119 407 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 WDR59Q6PJI9 974 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 TCEAL7Q9BRU2 100 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 TBC1D22BQ9NU19 505 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 CKLFQ9UBR5 152 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 CNTRLQ7Z7A1 2325 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 RORAP35398 523 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ST3GAL1Q11201 340 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 THAP5Q7Z6K1 395 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF567Q8N184 647 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF431Q8TF32 576 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-208ENST00000618395 SLC47A1Q96FL8 570 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 PCDHGA4Q9Y5G9 962 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 NPHP3-ACAD11A0A0J9YXS1 232 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms