RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 HMG20AQ9NP66 347 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 MRPL40Q9NQ50 206 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 ZC4H2Q9NQZ6 224 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.57□□□□□ -1.84
SMC5-204ENST00000618375 KBTBD4Q9NVX7 518 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 UCKL1Q9NWZ5 548 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 KCND2Q9NZV8 630 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 ZSWIM5Q9P217 1185 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 EIF3KQ9UBQ5 218 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 PARP2Q9UGN5 583 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SRRDQ9UH36 339 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 LGALS13Q9UHV8 139 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 ENOPH1Q9UHY7 261 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 TINAGQ9UJW2 476 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 FAM208AQ9UK61 1670 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 PTBP2Q9UKA9 531 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 BAG5Q9UL15 447 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 PNMA8BQ9ULN7 279 aaPredicted RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 CLEC4AQ9UMR7 237 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 CTNND2Q9UQB3 1225 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 SIK3Q9Y2K2 1263 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 MED16Q9Y2X0 877 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 DERAQ9Y315 318 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 CAB39Q9Y376 341 aaPredicted RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 CBY1Q9Y3M2 126 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 DTNAQ9Y4J8 743 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 PCDHA5Q9Y5H7 936 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 RBM8AQ9Y5S9 174 aaKnown RBP3.57□□□□□ -1.84
SMC5-204ENST00000618375 AUP1Q9Y679 476 aa3.57□□□□□ -1.84
SMC5-204ENST00000618375 DEPDC5O75140 1603 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 USP31Q70CQ4 1352 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 TDRD9Q8NDG6 1382 aaKnown RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 EMSYQ7Z589 1322 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 A0A1B0GTQ1 180 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 A0A1W2PQ72 361 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 LOC390937A0A1W2PQ73 354 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 ESYT3A0FGR9 886 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 TMEM120BA0PK00 339 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 ZSCAN5CA6NGD5 496 aaPredicted RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 CAPN8A6NHC0 703 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 TSPY2A6NKD2 308 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 LRRC53A6NM62 1247 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 BTNL10A8MVZ5 291 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 ZNF487B1APH4 448 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 TARM1B6A8C7 271 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 CLDN25C9JDP6 229 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 KLRF2D3W0D1 207 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 H3BSA7 217 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 PSMD12O00232 456 aaPredicted RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 SORBS3O60504 671 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 PLA2G6O60733 806 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 EDF1O60869 148 aaKnown RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 NOL3O60936 208 aaKnown RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 ZNF623O75123 536 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 USP2O75604 605 aaPredicted RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 SNX4O95219 450 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 RASGRP1O95267 797 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 IL1BP01584 269 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 APOC1P02654 83 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 IL6P05231 212 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 KRT8P05787 483 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 PGRP06401 933 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 CYP3A4P08684 503 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 C6orf222P0C671 652 aaPredicted RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 TSPY3P0CV98 308 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 TSPY8P0CW00 308 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 DBTP11182 482 aaKnown RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 ACTN1P12814 892 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 CDH1P12830 882 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 GARTP22102 1010 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 EEF1GP26641 437 aaKnown RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 RPA1P27694 616 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 NMT1P30419 496 aaKnown RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 CIITAP33076 1130 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 CDH5P33151 784 aaPredicted RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 GUCY1A2P33402 732 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 TRHRP34981 398 aaPredicted RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 SOX6P35712 828 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 PGM1P36871 562 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 CASP3P42574 277 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 GNPDA1P46926 289 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 PRIM2P49643 509 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 CCT4P50991 539 aaKnown RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 NDST1P52848 882 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 NKX2-5P52952 324 aaPredicted RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 HADHBP55084 474 aaKnown RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 AQP4P55087 323 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 RPL10AP62906 217 aaKnown RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 POU6F2P78424 691 aaPredicted RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 MYBPC1Q00872 1141 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 TSPY1Q01534 308 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 OTUD4Q01804 1114 aaKnown RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 ROR1Q01973 937 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 ZBTB16Q05516 673 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 GALNT2Q10471 571 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 FAPQ12884 760 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 TOP3AQ13472 1001 aaPredicted RBP3.56□□□□□ -1.84
SMC5-204ENST00000618375 PNOCQ13519 176 aa3.56□□□□□ -1.84
SMC5-204ENST00000618375 RIN1Q13671 783 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms