RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 E2F8A0AVK6 867 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 ELF1P32519 619 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 SPRP35270 261 aaPredicted RBP17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 MAGEA9P43362 315 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 LIMK2P53671 638 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 IRX4P78413 519 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 RNF43Q68DV7 783 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 FSTL4Q6MZW2 842 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 ESRP1Q6NXG1 681 aaKnown RBP17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 C16orf46Q6P387 395 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 POTEHQ6S545 545 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 CMC1Q7Z7K0 106 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 OR52K2Q8NGK3 314 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 ATP2A3Q93084 1043 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 PLD4Q96BZ4 506 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 ARMC5Q96C12 935 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 TRMT2BQ96GJ1 504 aaKnown RBP17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 PLCD4Q9BRC7 762 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 NPHS2Q9NP85 383 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 SLC2A6Q9UGQ3 507 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 TCAF1Q9Y4C2 921 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 CCDC195A0A1B0GUA6 201 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 KIAA0355O15063 1070 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 PRAMEF11O60813 436 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 GJB3O75712 270 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 TYK2P29597 1187 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 SCTRP47872 440 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 SGSHP51688 502 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 ACTN3Q08043 901 aaPredicted RBP17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 SEPT6Q14141 434 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 LBRQ14739 615 aaKnown RBP17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 PDPK2PQ6A1A2 396 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 DNAJB7Q7Z6W7 309 aaPredicted RBP17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 SNX15Q9NRS6 342 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 EMCNQ9ULC0 261 aa17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 MTO1Q9Y2Z2 717 aaKnown RBP17.58■□□□□ 0.41
PCDHGC3-205ENST00000617641 MIA3Q5JRA6 1907 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 KIAA1671Q9BY89 1806 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 UBOX5O94941 541 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 FSBPO95073 299 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 SPATA31D3P0C874 917 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 N4BP2L1Q5TBK1 243 aaPredicted RBP17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 SPATA31D4Q6ZUB0 917 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 MICALL1Q8N3F8 863 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 OR7D4Q8NG98 312 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 C10orf82Q8WW14 230 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 ACTR5Q9H9F9 607 aaPredicted RBP17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 MRPL17Q9NRX2 175 aaKnown RBP17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 INSL5Q9Y5Q6 135 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 ACTL7AQ9Y615 435 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 CAPN7Q9Y6W3 813 aa17.58■□□□□ 0.4
PCDHGC3-205ENST00000617641 PTPRSQ13332 1948 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 H3BNC9 293 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 TEX28O15482 410 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 GLRA3O75311 464 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 VAPBO95292 243 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 TNK2Q07912 1038 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 FYB2Q5VWT5 728 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 CES4AQ5XG92 561 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 TMEM150AQ86TG1 271 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 CCDC117Q8IWD4 279 aaPredicted RBP17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 FITM2Q8N6M3 262 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 ACVR1CQ8NER5 493 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 ARRDC2Q8TBH0 407 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 KLF16Q9BXK1 252 aaPredicted RBP17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 CAB39LQ9H9S4 337 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 ZNF334Q9HCZ1 680 aaPredicted RBP17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 ATP13A1Q9HD20 1204 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 SMPD4Q9NXE4 827 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 KIAA0100Q14667 2235 aaKnown RBP17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 ANAPC1Q9H1A4 1944 aa17.57■□□□□ 0.4
PCDHGC3-205ENST00000617641 MUSKO15146 869 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 TSPAN3O60637 253 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 EFCAB14O75071 495 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 ARNTP27540 789 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 HOXD9P28356 352 aaPredicted RBP17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 CA8P35219 290 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 SERPINB8P50452 374 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 GNA12Q03113 381 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 RABGAP1LQ5R372 815 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 TMCO4Q5TGY1 634 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 NUDCD3Q8IVD9 361 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 TCEAL8Q8IYN2 117 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 TMEM199Q8N511 208 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 MCMBPQ9BTE3 642 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 PDFQ9HBH1 243 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 VPS45Q9NRW7 570 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 SIRPGQ9P1W8 387 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 AGO1Q9UL18 857 aaKnown RBP17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 SCAMP3O14828 347 aaKnown RBP17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 BPGMP07738 259 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 MAGEA12P43365 314 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 EPHB3P54753 998 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 CSE1LP55060 971 aaKnown RBP17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 CDH4P55283 916 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 CHI3L2Q15782 390 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 CNGA3Q16281 694 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 KYAT3Q6YP21 454 aaKnown RBP17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 RFWD2Q8NHY2 731 aa17.56■□□□□ 0.4
PCDHGC3-205ENST00000617641 PTCD2Q8WV60 388 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms