RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ARF5P84085 180 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 IL9RQ01113 521 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 TYRO3Q06418 890 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 SMAD1Q15797 465 aaKnown RBP9.86□□□□□ -0.83
TARDBP-218ENST00000617172 ZNF284Q2VY69 593 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 EFHC2Q5JST6 749 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 ACAD10Q6JQN1 1059 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 KIAA1161Q6NSJ0 714 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 DNAJC24Q6P3W2 148 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 FBXL19Q6PCT2 694 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 DCUN1D2Q6PH85 259 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 TMPRSS12Q86WS5 348 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 GATAD2AQ86YP4 633 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 CHST14Q8NCH0 376 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 GRIN3AQ8TCU5 1115 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 ARHGEF2Q92974 986 aaKnown RBP9.86□□□□□ -0.83
TARDBP-218ENST00000617172 ARHGEF26Q96DR7 871 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 CNPY3Q9BT09 278 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 HSD3B7Q9H2F3 369 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 CATSPERBQ9H7T0 1116 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 HECAQ9UBI9 543 aaPredicted RBP9.86□□□□□ -0.83
TARDBP-218ENST00000617172 DNAI1Q9UI46 699 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 HS3ST3A1Q9Y663 406 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 WASF2Q9Y6W5 498 aa9.86□□□□□ -0.83
TARDBP-218ENST00000617172 CABIN1Q9Y6J0 2220 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 TCRBV5S1A1TA0A578 114 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 GOLGA8CPA6NN73 597 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 SRRM3A6NNA2 597 aaPredicted RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 EIF3CLB5ME19 914 aaKnown RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 FAM72CH0Y354 149 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 ENC1O14682 589 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 TSPAN6O43657 245 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 KDELR3O43731 214 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 GSRP00390 522 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 THEGLP0DJG4 465 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 ADRB3P13945 408 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 TNFAIP3P21580 790 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 EPHB2P29323 1055 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 ACVRL1P37023 503 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 CCNHP51946 323 aaPredicted RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 RAD51Q06609 339 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 SGCGQ13326 291 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 ILKQ13418 452 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 SHBQ15464 509 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 TMEM259Q4ZIN3 620 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 HS1BP3Q53T59 392 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 INO80DQ53TQ3 878 aaPredicted RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 ZNF805Q5CZA5 627 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 FAM72AQ5TYM5 149 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 SFMBT2Q5VUG0 894 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 FAM72DQ6L9T8 149 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 SCYL2Q6P3W7 929 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 IRF2BP2Q7Z5L9 587 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 FAM72BQ86X60 149 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 SPATS2Q86XZ4 545 aaKnown RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 MCOLN2Q8IZK6 566 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 AOPEPQ8N6M6 819 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 CCDC185Q8N715 623 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 RTL3Q8N8U3 475 aaKnown RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 OR2AP1Q8NGE2 309 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 ARRDC3Q96B67 414 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 IFT43Q96FT9 208 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 CNDP2Q96KP4 475 aaKnown RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 MCEEQ96PE7 176 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 EIF3CQ99613 913 aaKnown RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 EPAS1Q99814 870 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 OSBPL1AQ9BXW6 950 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 SLC17A9Q9BYT1 436 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 CCDC86Q9H6F5 360 aaKnown RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 RTN4Q9NQC3 1192 aaKnown RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 PARVAQ9NVD7 372 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 KLHL11Q9NVR0 708 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 DKK4Q9UBT3 224 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 FCF1Q9Y324 198 aaKnown RBP9.85□□□□□ -0.83
TARDBP-218ENST00000617172 SPEGQ15772 3267 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 USP24Q9UPU5 2620 aa9.85□□□□□ -0.83
TARDBP-218ENST00000617172 A0A1W2PQC6 194 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 NEMP2A6NFY4 417 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 C16orf96A6NNT2 1141 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 A6NNZ2 444 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 WASH4PA8MWX3 477 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 NEMP1O14524 444 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 FGF10O15520 208 aaPredicted RBP9.84□□□□□ -0.83
TARDBP-218ENST00000617172 BUB1O43683 1085 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 RFPL3O75679 317 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 GJB6O95452 261 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 CD160O95971 181 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 CAPNS1P04632 268 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 GZMAP12544 262 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 ATP1A3P13637 1013 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 HNF1BP35680 557 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 ZNF165P49910 485 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 RPL7AP62424 266 aaKnown RBP9.84□□□□□ -0.83
TARDBP-218ENST00000617172 BNIP3Q12983 259 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 MYLK3Q32MK0 819 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 PARP15Q460N3 678 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 ANO6Q4KMQ2 910 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 RAB6CQ53S08 254 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 PPP1R15BQ5SWA1 713 aa9.84□□□□□ -0.83
TARDBP-218ENST00000617172 ABI3BPQ7Z7G0 1075 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms