RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.95■□□□□ 0.14
NR1H3-235ENST00000616973 RANBP9Q96S59 729 aa15.95■□□□□ 0.14
NR1H3-235ENST00000616973 STN1Q9H668 368 aaKnown RBP15.95■□□□□ 0.14
NR1H3-235ENST00000616973 RETREG1Q9H6L5 497 aa15.95■□□□□ 0.14
NR1H3-235ENST00000616973 ZNF395Q9H8N7 513 aaPredicted RBP15.95■□□□□ 0.14
NR1H3-235ENST00000616973 NOD2Q9HC29 1040 aa15.95■□□□□ 0.14
NR1H3-235ENST00000616973 TREX1Q9NSU2 369 aa15.95■□□□□ 0.14
NR1H3-235ENST00000616973 NT5C1B-RDH14C9J2C7 533 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 C2P06681 752 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 CPA3P15088 417 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 SLC1A6P48664 564 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 MAPKAPK2P49137 400 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 WNT3AP56704 352 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 IL10RBQ08334 325 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 C5orf22Q49AR2 442 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 KIAA0930Q6ICG6 404 aaPredicted RBP15.94■□□□□ 0.14
NR1H3-235ENST00000616973 SLC8B1Q6J4K2 584 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 ZCCHC23Q6ZST2 131 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 TAS1R1Q7RTX1 841 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 TMEM173Q86WV6 379 aaPredicted RBP15.94■□□□□ 0.14
NR1H3-235ENST00000616973 MIB1Q86YT6 1006 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 C10orf107Q8IVU9 208 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 PLD6Q8N2A8 252 aaKnown RBP15.94■□□□□ 0.14
NR1H3-235ENST00000616973 BCL7CQ8WUZ0 217 aaPredicted RBP15.94■□□□□ 0.14
NR1H3-235ENST00000616973 UTP4Q969X6 686 aaKnown RBP15.94■□□□□ 0.14
NR1H3-235ENST00000616973 TADA1Q96BN2 335 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 PTCD3Q96EY7 689 aaKnown RBP15.94■□□□□ 0.14
NR1H3-235ENST00000616973 NSL1Q96IY1 281 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 UNC93B1Q9H1C4 597 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 FAM96AQ9H5X1 160 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 SP110Q9HB58 689 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 PAK6Q9NQU5 681 aaPredicted RBP15.94■□□□□ 0.14
NR1H3-235ENST00000616973 MTRRQ9UBK8 725 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 MID2Q9UJV3 735 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 J3KR12 359 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 FCHO1O14526 889 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 TLR5O60602 858 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 ATF6P18850 670 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 KCNA4P22459 653 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 GRM3Q14832 879 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 SNX30Q5VWJ9 437 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 FBXO22Q8NEZ5 403 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 PIWIL2Q8TC59 973 aaKnown RBP15.94■□□□□ 0.14
NR1H3-235ENST00000616973 NSMCE1Q8WV22 266 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 OVCA2Q8WZ82 227 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 ATXN7L3BQ96GX2 97 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 FBXO6Q9NRD1 293 aaPredicted RBP15.94■□□□□ 0.14
NR1H3-235ENST00000616973 BACE2Q9Y5Z0 518 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 CDY1Q9Y6F8 540 aa15.94■□□□□ 0.14
NR1H3-235ENST00000616973 WFS1O76024 890 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 APOA4P06727 396 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 RALBP11234 206 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 COL6A2P12110 1019 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 ARNTP27540 789 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 SLC8A1P32418 973 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 HARS2P49590 506 aaKnown RBP15.93■□□□□ 0.14
NR1H3-235ENST00000616973 SLC10A7Q0GE19 358 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 SERINC3Q13530 473 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 POLD3Q15054 466 aaPredicted RBP15.93■□□□□ 0.14
NR1H3-235ENST00000616973 ESRP1Q6NXG1 681 aaKnown RBP15.93■□□□□ 0.14
NR1H3-235ENST00000616973 PRSS55Q6UWB4 352 aaPredicted RBP15.93■□□□□ 0.14
NR1H3-235ENST00000616973 WDR75Q8IWA0 830 aaKnown RBP15.93■□□□□ 0.14
NR1H3-235ENST00000616973 RDH11Q8TC12 318 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 SH3TC2Q8TF17 1288 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 RPRD1AQ96P16 312 aaPredicted RBP15.93■□□□□ 0.14
NR1H3-235ENST00000616973 TBC1D10AQ9BXI6 508 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 CCSER2Q9H7U1 834 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 CAB39LQ9H9S4 337 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 NT5MQ9NPB1 228 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 ARL8BQ9NVJ2 186 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 ZNF358Q9NW07 568 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 BAIAP2L1Q9UHR4 511 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 STK38LQ9Y2H1 464 aa15.93■□□□□ 0.14
NR1H3-235ENST00000616973 MRPL42Q9Y6G3 142 aaKnown RBP15.93■□□□□ 0.14
NR1H3-235ENST00000616973 HEATR9A2RTY3 570 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 C2orf71A6NGG8 1288 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 ITM2AO43736 263 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 CCDC22O60826 627 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 RAMP2O60895 175 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 H2AFYO75367 372 aaKnown RBP15.92■□□□□ 0.14
NR1H3-235ENST00000616973 VAPBO95292 243 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 PAPSS2O95340 614 aaPredicted RBP15.92■□□□□ 0.14
NR1H3-235ENST00000616973 AHSGP02765 367 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 MMP2P08253 660 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 CALB2P22676 271 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 GABRB3P28472 473 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 TUFMP49411 452 aaKnown RBP15.92■□□□□ 0.14
NR1H3-235ENST00000616973 VEGFBP49765 207 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 AQP5P55064 265 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 NADSYN1Q6IA69 706 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 RNF168Q8IYW5 571 aaPredicted RBP15.92■□□□□ 0.14
NR1H3-235ENST00000616973 C2CD4AQ8NCU7 369 aaPredicted RBP15.92■□□□□ 0.14
NR1H3-235ENST00000616973 PDZD8Q8NEN9 1154 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 GIPC2Q8TF65 315 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 PSMG2Q969U7 264 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 FAM167BQ9BTA0 163 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 C1QTNF1Q9BXJ1 281 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 NMRAL1Q9HBL8 299 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 SAGE1Q9NXZ1 904 aa15.92■□□□□ 0.14
NR1H3-235ENST00000616973 OGDHLQ9ULD0 1010 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms