RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 GLT6D1Q7Z4J2 308 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 RPAINQ86UA6 219 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 RELL1Q8IUW5 271 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 SLC22A9Q8IVM8 553 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 KYQ8NBH2 561 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 HDAC10Q969S8 669 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 ZNF333Q96JL9 665 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 CRTAC1Q9NQ79 661 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 ACSS2Q9NR19 701 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 DNMT3LQ9UJW3 386 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 CHKBQ9Y259 395 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 UBTFL6P0CB48 400 aaPredicted RBP13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 IL10P22301 178 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 RAB10P61026 200 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 AARS2Q5JTZ9 985 aaKnown RBP13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 HERC6Q8IVU3 1022 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 KCTD13Q8WZ19 329 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 PBXIP1Q96AQ6 731 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 RHOJQ9H4E5 214 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 C15orf41Q9Y2V0 281 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 OR6C75A6NL08 312 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 A8MUI8 341 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 LBRQ14739 615 aaKnown RBP13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 TMTC4Q5T4D3 741 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 CEP70Q8NHQ1 597 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 CD99L2Q8TCZ2 262 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 TEKT5Q96M29 485 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 NPY6RQ99463 290 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 CENPKQ9BS16 269 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 ALG9Q9H6U8 611 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 TRIM16O95361 564 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 FMO4P31512 558 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 WASHC5Q12768 1159 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 NTAN1Q96AB6 310 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 TSC22D3Q99576 134 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 CLPBQ9H078 707 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 TAS2R13Q9NYV9 303 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 DLGAP2Q9P1A6 1054 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 IGSF9Q9P2J2 1179 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 VTI1BQ9UEU0 232 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 KAT6AQ92794 2004 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 A0A0U1RQF3 1178 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 PRR5-ARHGAP8B1AHC4 643 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 AKAP10O43572 662 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 BEST1O76090 585 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 EEF1B2P24534 225 aaKnown RBP13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 GLUD2P49448 558 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 ARHGAP8P85298 464 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 VARS2Q5ST30 1063 aaKnown RBP13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 EMC10Q5UCC4 262 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 ANGPTL8Q6UXH0 198 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 SPPL2BQ8TCT7 592 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 AGAP2Q99490 1192 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 USP29Q9HBJ7 922 aa13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 MYH9P35579 1960 aaKnown RBP13.36□□□□□ -0.27
PPP4R3B-206ENST00000616407 TMEM88BA6NKF7 163 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 ITGB6P18564 788 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 CCNCP24863 283 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 UGT3A1Q6NUS8 523 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 ELMSAN1Q6PJG2 1045 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 DDX53Q86TM3 631 aaKnown RBP13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 TMEM39AQ9NV64 488 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 RIC8BQ9NVN3 520 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 TMEM51Q9NW97 253 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 TMEM216Q9P0N5 145 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 COPG2Q9UBF2 871 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 PCDHB8Q9UN66 801 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 MEIS3P2A8K0S8 358 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 NMBRP28336 390 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 KCNK10P57789 538 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 SLC34A1Q06495 639 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 FSTL4Q6MZW2 842 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 SMG8Q8ND04 991 aaKnown RBP13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 DBF4BQ8NFT6 615 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 GANCQ8TET4 914 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 BTN2A3PQ96KV6 586 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 ANLNQ9NQW6 1124 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 PLIN3O60664 434 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 LTA4HP09960 611 aaKnown RBP13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 MYL4P12829 197 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 EPHA3P29320 983 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 ESRRGP62508 458 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 PLIN5Q00G26 463 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 MTA1Q13330 715 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 OLIG2Q13516 323 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 PTK2BQ14289 1009 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 GRM3Q14832 879 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 HS6ST3Q8IZP7 471 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 ARFGAP1Q8N6T3 406 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 TTPALQ9BTX7 342 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 EPB41L4BQ9H329 900 aa13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 HBS1LQ9Y450 684 aaKnown RBP13.35□□□□□ -0.27
PPP4R3B-206ENST00000616407 A0A087X1B8 175 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 ATP5BP06576 529 aaKnown RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 TSPAN8P19075 237 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 TFEBP19484 476 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 LRPAP1P30533 357 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms