RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ZZZ3Q8IYH5 903 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 IL22RA1Q8N6P7 574 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 TRMT10AQ8TBZ6 339 aaKnown RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 SMARCD1Q96GM5 515 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 DPYSL5Q9BPU6 564 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 FAM118BQ9BPY3 351 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 FAM126AQ9BYI3 521 aaPredicted RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 VCPKMTQ9H867 229 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 TRAPPC8Q9Y2L5 1435 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 CCDC163A0A0D9SF12 145 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 DGKAP23743 735 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 AVPR1BP47901 424 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 IRF8Q02556 426 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 PDSS1Q5T2R2 415 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 GMCL1P1Q8NEA9 526 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 COQ8BQ96D53 544 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 CCT8L2Q96SF2 557 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 PRDM8Q9NQV8 689 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 RUVBL1Q9Y265 456 aaKnown RBP12.78□□□□□ -0.36
TCF4-248ENST00000616053 SH3D21A4FU49 640 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 MFAP3LO75121 409 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 FGF19O95750 216 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 PPP3R1P63098 170 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 ALG10BQ5I7T1 473 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 STRA8Q7Z7C7 330 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 VSTM4Q8IW00 320 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 PHF21BQ96EK2 531 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 LRMDAQ9H2I8 198 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 LIMD1Q9UGP4 676 aa12.78□□□□□ -0.36
TCF4-248ENST00000616053 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 ZSCAN5CA6NGD5 496 aaPredicted RBP12.77□□□□□ -0.36
TCF4-248ENST00000616053 UBXN7O94888 489 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 FGBP02675 491 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 NTRK1P04629 796 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 NT5EP21589 574 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 IL13P35225 146 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 RESTQ13127 1097 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 NOGQ13253 232 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 ESCO2Q56NI9 601 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 KCNT1Q5JUK3 1230 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 SMG7Q92540 1137 aaKnown RBP12.77□□□□□ -0.36
TCF4-248ENST00000616053 LENG9Q96B70 501 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 B3GAT2Q9NPZ5 323 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 PIH1D3Q9NQM4 214 aaKnown RBP12.77□□□□□ -0.36
TCF4-248ENST00000616053 SDR42E2A6NKP2 422 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 ELFN1P0C7U0 828 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 PLA2G4EQ3MJ16 856 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.36
TCF4-248ENST00000616053 OR56A4Q8NGH8 313 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 SLC16A10Q8TF71 515 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 MTO1Q9Y2Z2 717 aaKnown RBP12.77□□□□□ -0.36
TCF4-248ENST00000616053 KAT6AQ92794 2004 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 ANKARQ7Z5J8 1434 aa12.77□□□□□ -0.36
TCF4-248ENST00000616053 M0R129 80 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 HECTD2Q5U5R9 776 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 TMEM156Q8N614 296 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 AIFM2Q9BRQ8 373 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 TBC1D30Q9Y2I9 924 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 USP20Q9Y2K6 914 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 TBL1XO60907 577 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 FDPSP14324 419 aaKnown RBP12.77□□□□□ -0.37
TCF4-248ENST00000616053 PLP2Q04941 152 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 GRM4Q14833 912 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.37
TCF4-248ENST00000616053 DHRSXQ8N5I4 330 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 GAB3Q8WWW8 586 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 CCDC80Q76M96 950 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 ZNF615Q8N8J6 731 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 FBXO15Q8NCQ5 510 aaPredicted RBP12.77□□□□□ -0.37
TCF4-248ENST00000616053 MTRRQ9UBK8 725 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 BTN3A1O00481 513 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 NUAK1O60285 661 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 OR1I1O60431 355 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 SEMA3DO95025 777 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 PRH1P02810 166 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.77□□□□□ -0.37
TCF4-248ENST00000616053 FAM151AQ8WW52 585 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 KLF6Q99612 283 aaPredicted RBP12.77□□□□□ -0.37
TCF4-248ENST00000616053 ADAM2Q99965 735 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 GHRLQ9UBU3 117 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 PCDHGC3Q9UN70 934 aa12.77□□□□□ -0.37
TCF4-248ENST00000616053 PPIGQ13427 754 aaKnown RBP eCLIP12.76□□□□□ -0.37
TCF4-248ENST00000616053 BEND4Q6ZU67 534 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 BARHL2Q9NY43 387 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
TCF4-248ENST00000616053 DAPK2Q9UIK4 370 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 DNPEPQ9ULA0 475 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 PTCH1Q13635 1447 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 A0A075B6Q4 140 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 ZNF726A6NNF4 738 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 FMO4P31512 558 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 MPP3Q13368 585 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 MZT2BQ6NZ67 158 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 RELTQ969Z4 430 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 CELF6Q96J87 481 aaKnown RBP12.76□□□□□ -0.37
TCF4-248ENST00000616053 TAF1DQ9H5J8 278 aaPredicted RBP12.76□□□□□ -0.37
TCF4-248ENST00000616053 GRIP1Q9Y3R0 1128 aa12.76□□□□□ -0.37
TCF4-248ENST00000616053 PCDHB2Q9Y5E7 798 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms