RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 MIR1-1HGQ9H1L0 117 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 TMEM9Q9P0T7 183 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 MTRRQ9UBK8 725 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 MYO18AQ92614 2054 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 ZNF195O14628 629 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 TEX28O15482 410 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 PAPSS1O43252 624 aaPredicted RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 MSI1O43347 362 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 LRCH4O75427 683 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 FASP25445 335 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 RPL14P50914 215 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 SPP2Q13103 211 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 PPP4R4Q6NUP7 873 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 UGT3A1Q6NUS8 523 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 NAPRTQ6XQN6 538 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 CDR2LQ86X02 465 aaPredicted RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 SFRP1Q8N474 314 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 TRIT1Q9H3H1 467 aaKnown RBP10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 PNPLA8Q9NP80 782 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 OAZ3Q9UMX2 235 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 SBF2Q86WG5 1849 aa10.51□□□□□ -0.73
TNFAIP3-208ENST00000615468 EI24O14681 340 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 RAD51BO15315 384 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 SYNCRIPO60506 623 aaKnown RBP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 CCNKO75909 580 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 ALBP02768 609 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 ERVK-10P10266 1014 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 CDH1P12830 882 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 TFEBP19484 476 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 HARS2P49590 506 aaKnown RBP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 ECT2LQ008S8 904 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 CREB5Q02930 508 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 TFDP2Q14188 446 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 CCDC58Q4VC31 144 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 FAM117BQ6P1L5 589 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 GATAD2AQ86YP4 633 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 DEPDC4Q8N2C3 294 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 NLGN2Q8NFZ4 835 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 ZFP90Q8TF47 636 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 SNX19Q92543 992 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 GATA5Q9BWX5 397 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 MKS1Q9NXB0 559 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 PSAT1Q9Y617 370 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 IGKV6D-41A0A0C4DH26 115 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 C9IYK1 514 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 PTGES3LE9PB15 166 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 ATICP31939 592 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 LIG4P49917 911 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 SLC7A2P52569 658 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 NSUN2Q08J23 767 aaKnown RBP eCLIP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 TRIM32Q13049 653 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 STX5Q13190 355 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 TMTC4Q5T4D3 741 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 NBPF12Q5TAG4 269 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 PDPRQ8NCN5 879 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 FAM110BQ8TC76 370 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 TMC2Q8TDI7 906 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 DCAF4Q8WV16 495 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 FAM151AQ8WW52 585 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 CHID1Q9BWS9 393 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 FRMD8P1Q9BZ68 369 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 RSAD1Q9HA92 442 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 MOV10Q9HCE1 1003 aaKnown RBP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 ITM2CQ9NQX7 267 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 GPATCH2LQ9NWQ4 482 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 RBAKQ9NYW8 714 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 ANGPTL3Q9Y5C1 460 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 PEX10O60683 326 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 XYLBO75191 536 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 GSRP00390 522 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 MYF6P23409 242 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 CNTFP26441 200 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 ELK4P28324 431 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 MIPP30301 263 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 BROXQ5VW32 411 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 HMBOX1Q6NT76 420 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 PLEKHG7Q6ZR37 379 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 FIG4Q92562 907 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 SEPT8Q92599 483 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 IL12RB2Q99665 862 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 C9orf16Q9BUW7 83 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 TASP1Q9H6P5 420 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 CAB39LQ9H9S4 337 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 AGO2Q9UKV8 859 aaKnown RBP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 CAB39Q9Y376 341 aaPredicted RBP10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 SNX5Q9Y5X3 404 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 SLX4Q8IY92 1834 aa10.5□□□□□ -0.73
TNFAIP3-208ENST00000615468 FAM159BA6NKW6 160 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 SRP72O76094 671 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 CRYZL1O95825 349 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 LTFP02788 710 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 DDX5P17844 614 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 GLDCP23378 1020 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 TMBIM6P55061 237 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 STX1BP61266 288 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 INPP5AQ14642 412 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 IMPG1Q17R60 797 aa10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 ARL13AQ5H913 290 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-208ENST00000615468 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms