RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 VARSP26640 1264 aaKnown RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 CCNFP41002 786 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 CDK18Q07002 472 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 PPP3CAQ08209 521 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 POU6F1Q14863 301 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 CHI3L2Q15782 390 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 LDLRAP1Q5SW96 308 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 MILR1Q7Z6M3 343 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 RAVER1Q8IY67 606 aaKnown RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 STAG3L4Q8TBR4 150 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 ACTL9Q8TC94 416 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 SCHIP1Q9P0W5 487 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 CORO1CQ9ULV4 474 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 RASSF9O75901 435 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 KCNE1P15382 129 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 CCNCP24863 283 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 GPR15P49685 360 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 BEND6Q5SZJ8 279 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 SRFBP1Q8NEF9 429 aaKnown RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 SCLYQ96I15 445 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 DUSP9Q99956 384 aaKnown RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 ARHGEF4Q9NR80 690 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 PHTF1Q9UMS5 762 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 YIPF1Q9Y548 306 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 PCDHB11Q9Y5F2 797 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 C1orf232A0A0U1RR37 186 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 MLYCDO95822 493 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 SPAM1P38567 509 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 POTEHQ6S545 545 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 C17orf99Q6UX52 265 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 ADAMTSL2Q86TH1 951 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 ST13P4Q8IZP2 240 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 SPATA20Q8TB22 786 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 RDH11Q8TC12 318 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 EPS8L1Q8TE68 723 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 C8orf48Q96LL4 319 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 FBXL18Q96ME1 805 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 RNF157Q96PX1 679 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 TTLL2Q9BWV7 592 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 CERS4Q9HA82 394 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 KLHL3Q9UH77 587 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 EFR3BQ9Y2G0 817 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 C4BPAP04003 597 aaKnown RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 GSNP06396 782 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 THRAP10827 490 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 R3HCC1LQ7Z5L2 792 aaKnown RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 RIN3Q8TB24 985 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 ADAM32Q8TC27 787 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 CD101Q93033 1021 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 C9orf72Q96LT7 481 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 PHACTR1Q9C0D0 580 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 TMEM216Q9P0N5 145 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 SYN1P17600 705 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 CMPK1P30085 196 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 LSP1P33241 339 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 PGS1Q32NB8 556 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 CERS6Q6ZMG9 384 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 CCNI2Q6ZMN8 369 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 GKN2Q86XP6 184 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 TMEM192Q8IY95 271 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 FNIP1Q8TF40 1166 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 METTL21AQ8WXB1 218 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 FCRL2Q96LA5 508 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 IL12RB2Q99665 862 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 SNRNP25Q9BV90 132 aaKnown RBP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 TMPRSS4Q9NRS4 437 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 ARL15Q9NXU5 204 aa9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.85□□□□□ -0.83
TNFRSF9-204ENST00000615230 SYNDIG1LA6NDD5 238 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 E9PAM4 449 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZBTB39O15060 712 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 PMM2O15305 246 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 SPATA31D3P0C874 917 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 ALDH18A1P54886 795 aaKnown RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 CACNG1Q06432 222 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 DDX39BQ13838 428 aaKnown RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 CSHL1Q14406 222 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 CYP51A1Q16850 503 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 PAPD7Q5XG87 772 aaKnown RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 SEL1L3Q68CR1 1132 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZNF776Q68DI1 518 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 SPATA31D4Q6ZUB0 917 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 OR14C36Q8NHC7 312 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 VPS33AQ96AX1 596 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 ZNF514Q96K75 400 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 CLIC5Q9NZA1 410 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 TLR6Q9Y2C9 796 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 CPQQ9Y646 472 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 FOSL2P15408 326 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 NRIP1P48552 1158 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 NOMO3P69849 1222 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 BTKQ06187 659 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 CSTF3Q12996 717 aaKnown RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 CDCA2Q69YH5 1023 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 BPIFB1Q8TDL5 484 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 TNFRSF25Q93038 417 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 COPS8Q99627 209 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 TMEM121Q9BTD3 319 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 PCDHGB3Q9Y5G1 929 aa9.84□□□□□ -0.83
TNFRSF9-204ENST00000615230 ITGAVP06756 1048 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms