RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 DNALI1O14645 258 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-212ENST00000613856 MATN3O15232 486 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 HOXC11O43248 304 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-212ENST00000613856 PRAMEF11O60813 436 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 ECI2O75521 394 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 SEC31AO94979 1220 aaKnown RBP11.65□□□□□ -0.54
SLIRP-212ENST00000613856 PEX11BO96011 259 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 RETP07949 1114 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 ZSCAN5DPP0CG00 497 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 PTPN3P26045 913 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 VIPR2P41587 438 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 IFNAR2P48551 515 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 CAV1Q03135 178 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 TNK2Q07912 1038 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 FCHO2Q0JRZ9 810 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 GPS1Q13098 491 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 SLC12A1Q13621 1099 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 CDH18Q13634 790 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 SIM2Q14190 667 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-212ENST00000613856 BRD3Q15059 726 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 PDGFRLQ15198 375 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 CSRP2Q16527 193 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 EML3Q32P44 896 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 VITQ6UXI7 678 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 ARHGAP36Q6ZRI8 547 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 B4GALNT4Q76KP1 1039 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 MFN1Q8IWA4 741 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 CCDC117Q8IWD4 279 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-212ENST00000613856 CARNMT1Q8N4J0 409 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 TTC16Q8NEE8 873 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 OR52K2Q8NGK3 314 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 FIBINQ8TAL6 211 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 DEPDC1BQ8WUY9 529 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 ELSPBP1Q96BH3 223 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 ZNF599Q96NL3 588 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 IL12RB2Q99665 862 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 ACE2Q9BYF1 805 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-212ENST00000613856 DPH5Q9H2P9 285 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 SP110Q9HB58 689 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 PDFQ9HBH1 243 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 THG1LQ9NWX6 298 aaKnown RBP11.65□□□□□ -0.54
SLIRP-212ENST00000613856 DUS2Q9NX74 493 aaKnown RBP11.65□□□□□ -0.54
SLIRP-212ENST00000613856 TRHDEQ9UKU6 1024 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 ANGPTL2Q9UKU9 493 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 RAB23Q9ULC3 237 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 SNX24Q9Y343 169 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 OR51B4Q9Y5P0 310 aa11.65□□□□□ -0.54
SLIRP-212ENST00000613856 CCDC151A5D8V7 595 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 C1QTNF9BB2RNN3 333 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 K7ESF4 209 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 SMAPO00193 183 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 DYNC1I1O14576 645 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 TM4SF5O14894 197 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 KDELR3O43731 214 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 NFATC1O95644 943 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ADH1CP00326 375 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 CYP17A1P05093 508 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 C1QTNF9P0C862 333 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 CHRNB1P11230 501 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ETS1P14921 441 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 H2AFXP16104 143 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ITIH2P19823 946 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ECHS1P30084 290 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ACVRL1P37023 503 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ADCY8P40145 1251 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 MAGEA6P43360 314 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 SOX9P48436 509 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 VPS41P49754 854 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 PLK1P53350 603 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 NRLP54845 237 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ZBTB17Q13105 803 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 CALCOCO2Q13137 446 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 HNRNPDQ14103 355 aaKnown RBP11.64□□□□□ -0.55
SLIRP-212ENST00000613856 TRIP13Q15645 432 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-212ENST00000613856 TEX44Q53QW1 395 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ANKRD20A2Q5SQ80 823 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 LY6G5CQ5SRR4 150 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 TMCO4Q5TGY1 634 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ANKRD20A1Q5TYW2 823 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ANKRD20A3Q5VUR7 823 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 IZUMO3Q5VZ72 239 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ITPRIPL1Q6GPH6 555 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ZDHHC24Q6UX98 284 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 CCNI2Q6ZMN8 369 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ARHGEF18Q6ZSZ5 1173 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 TPGS1Q6ZTW0 290 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 PCGF5Q86SE9 256 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 PRUNE1Q86TP1 453 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 HOOK3Q86VS8 718 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 TMEM25Q86YD3 366 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 MFSD6LQ8IWD5 586 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ADGRG2Q8IZP9 1017 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ZNF567Q8N184 647 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 FAM160A2Q8N612 972 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-212ENST00000613856 TEX26Q8N6G2 289 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.64□□□□□ -0.55
SLIRP-212ENST00000613856 DCAF4L2Q8NA75 395 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 OR7D4Q8NG98 312 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 CCDC110Q8TBZ0 833 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 WFDC5Q8TCV5 224 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms