RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 BCAS2O75934 225 aaPredicted RBP22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 EOMESO95936 686 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 POMCP01189 267 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 MAGEA3P43357 314 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 SCNN1GP51170 649 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 TFDP2Q14188 446 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 ZNF829Q3KNS6 432 aaPredicted RBP22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 N4BP2L1Q5TBK1 243 aaPredicted RBP22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 MROH9Q5TGP6 573 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 ALKAL1Q6UXT8 129 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 CAND1Q86VP6 1230 aaKnown RBP22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 KCTD6Q8NC69 237 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 RP9Q8TA86 221 aaKnown RBP22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 ANKRD36BP1Q96IX9 119 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 RAB6BQ9NRW1 208 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 PNPOQ9NVS9 261 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 CACNG4Q9UBN1 327 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 RNF11Q9Y3C5 154 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 RGSL1A5PLK6 1076 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 AVILO75366 819 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 TNNC2P02585 160 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 KRT19P08727 400 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 ZNF26P17031 533 aaPredicted RBP22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 IL1R2P27930 398 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 NAA20P61599 178 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 NAB1Q13506 487 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 TMEM132DQ14C87 1099 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 CCDC80Q76M96 950 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 PGAM4Q8N0Y7 254 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 TERB1Q8NA31 727 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 C18orf25Q96B23 403 aaPredicted RBP22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 PKP2Q99959 881 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 SDCBP2Q9H190 292 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 ASB7Q9H672 318 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 SLC8A2Q9UPR5 921 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 PCDHB12Q9Y5F1 795 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 PCDHA11Q9Y5I1 949 aa22.26■■□□□ 1.15
POLR2J3-220ENST00000613744 SMIM28A0A1B0GU29 152 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 PTGESO14684 152 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 UGT1A9O60656 530 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 BAIAP3O94812 1187 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 GLDCP23378 1020 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 SSTR3P32745 418 aaPredicted RBP22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 HOXD12P35452 270 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 ESRRGP62508 458 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 RFTN1Q14699 578 aaPredicted RBP22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 HERC3Q15034 1050 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 C9orf50Q5SZB4 431 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 PSRC1Q6PGN9 363 aaPredicted RBP22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 ELMSAN1Q6PJG2 1045 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 PDCD6IPQ8WUM4 868 aaKnown RBP22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 EBNA1BP2Q99848 306 aaKnown RBP22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 SHCBP1LQ9BZQ2 653 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 UGT1A7Q9HAW7 530 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 UGT1A10Q9HAW8 530 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 UGT1A8Q9HAW9 530 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 PTBP2Q9UKA9 531 aaKnown RBP22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 GIT1Q9Y2X7 761 aa22.25■■□□□ 1.15
POLR2J3-220ENST00000613744 SOBPA7XYQ1 873 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 CST3P01034 146 aaPredicted RBP22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 AMHP03971 560 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 ZNF24P17028 368 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 HK2P52789 917 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 PAN2Q504Q3 1202 aaKnown RBP22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 PAOXQ6QHF9 649 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 CRIPAKQ8N1N5 446 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 ARFGAP1Q8N6T3 406 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 EFCAB3Q8N7B9 438 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 ADAMTS16Q8TE57 1224 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 DEPDC1BQ8WUY9 529 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 FERMT1Q9BQL6 677 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 CDH19Q9H159 772 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 GOLGA2P5Q9HBQ8 144 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 EPS15L1Q9UBC2 864 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 MYOCOSA0A1B0GUC4 107 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 ARHGEF37A1IGU5 675 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 ENDOD1O94919 500 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 ME2P23368 584 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 STT3AP46977 705 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 THOP1P52888 689 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 AP3M2P53677 418 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 SMTNL2Q2TAL5 461 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 ZBED5Q49AG3 693 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 KCTD21Q4G0X4 260 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 DSELQ8IZU8 1212 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 RMND5BQ96G75 393 aaPredicted RBP22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 PLEKHA5Q9HAU0 1116 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 HCSTQ9UBK5 93 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 COQ6Q9Y2Z9 468 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 NUB1Q9Y5A7 615 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 LAMA3Q16787 3333 aa22.24■■□□□ 1.15
POLR2J3-220ENST00000613744 HTR3EA5X5Y0 456 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 ZBTB14O43829 449 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 RALBP11234 206 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 KRT3P12035 628 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 MX2P20592 715 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 TTKP33981 857 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 NUDT2P50583 147 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 TGFBIQ15582 683 aa22.23■■□□□ 1.15
POLR2J3-220ENST00000613744 GLB1LQ6UWU2 654 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms