RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 TMEM51Q9NW97 253 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 GRHL1Q9NZI5 618 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 A0A1W2PQ45 241 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 A0A1W2PQY0 241 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 DCXO43602 365 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 THRAP10827 490 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 NQO1P15559 274 aaKnown RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 TSPAN8P19075 237 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 TACR2P21452 398 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 POLR2LP62875 67 aaKnown RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 SOX4Q06945 474 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 LPIN1Q14693 890 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 PFKFB4Q16877 469 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 CYB5D1Q6P9G0 228 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 SLC22A9Q8IVM8 553 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 NAV1Q8NEY1 1877 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 CMASQ8NFW8 434 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-218ENST00000610726 OR52K2Q8NGK3 314 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 TMEM159Q96B96 161 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 POMKQ9H5K3 350 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 SYNDIG1Q9H7V2 258 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 EFCAB1Q9HAE3 211 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 ZNF212Q9UDV6 495 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 FBXW11Q9UKB1 542 aa7.37□□□□□ -1.23
CSDE1-218ENST00000610726 CARNS1A5YM72 827 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SNX3O60493 162 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 H2AFYO75367 372 aaKnown RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SH3BGRLO75368 114 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CLDN11O75508 207 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PARNO95453 639 aaKnown RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 IQCF3P0C7M6 154 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 DSC2Q02487 901 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 FLOT2Q14254 428 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CCDC142Q17RM4 750 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 DOK6Q6PKX4 331 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 C17orf99Q6UX52 265 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SERPINA13PQ6UXR4 307 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PACS1Q6VY07 963 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SYTL1Q8IYJ3 562 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 GALNT4Q8N4A0 578 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 RNF148Q8N7C7 305 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 C12orf50Q8NA57 414 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ZNF296Q8WUU4 475 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 EME1Q96AY2 570 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PIWIL1Q96J94 861 aaKnown RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 FAR2Q96K12 515 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PDLIM7Q9NR12 457 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 GID8Q9NWU2 228 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SLC17A7Q9P2U7 560 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CLCA2Q9UQC9 943 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CACNA1SQ13698 1873 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 FAM237BA0A1B0GVD1 139 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PDZK1P1A8MUH7 402 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 NEDD8-MDP1E9PL57 170 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 UBDO15205 165 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 BAIAP3O94812 1187 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 RHOQP17081 205 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 TFEBP19484 476 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 GATMP50440 423 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PFKPQ01813 784 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 TCEA2Q15560 299 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SPDYE7PQ495Y7 208 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CES5AQ6NT32 575 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 RHBDF2Q6PJF5 856 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 POTEHQ6S545 545 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ZNF280BQ86YH2 543 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 C7orf61Q8IZ16 206 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 GLIS1Q8NBF1 620 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PAWRQ96IZ0 340 aaKnown RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SUSD3Q96L08 255 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 QKIQ96PU8 341 aaKnown RBP eCLIP7.36□□□□□ -1.232e-14■■■□□ 16.7
CSDE1-218ENST00000610726 OSBPL1AQ9BXW6 950 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 GPR88Q9GZN0 384 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 MRPL46Q9H2W6 279 aaKnown RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ELOVL6Q9H5J4 265 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 GKN1Q9NS71 199 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 FZD10Q9ULW2 581 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ACTL7BQ9Y614 415 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 TTC36A6NLP5 189 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SLCO1B7G3V0H7 640 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 NR5A2O00482 541 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SLC9A3R1O14745 358 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ACSL4O60488 711 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 FKBP9O95302 570 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CCL5P13501 91 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ALADP13716 330 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CALB2P22676 271 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 IL2P60568 153 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 NAB1Q13506 487 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CYLC2Q14093 348 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PTK2BQ14289 1009 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 OLFML1Q6UWY5 402 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 AGMOQ6ZNB7 445 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 USP45Q70EL2 814 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 FKBP9P1Q75LS8 142 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 MARK2Q7KZI7 788 aaKnown RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 DET1Q7L5Y6 550 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SERINC5Q86VE9 423 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PHACTR4Q8IZ21 702 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 METTL6Q8TCB7 284 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms