RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 MEI4A8MW99 385 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 SLC30A4O14863 429 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 TM4SF5O14894 197 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 BUB1O43683 1085 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 MTA2O94776 668 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 TMCC1O94876 653 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 LCA5LO95447 670 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 SERPINF2P08697 491 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 CD48P09326 243 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 GKP32189 559 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 HOXD12P35452 270 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 PAPOLAP51003 745 aaKnown RBP12.98□□□□□ -0.33
CD9-212ENST00000610354 CCNHP51946 323 aaPredicted RBP12.98□□□□□ -0.33
CD9-212ENST00000610354 NDST2P52849 883 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 LIMK1P53667 647 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 ADPRHP54922 357 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 MMRN1Q13201 1228 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 PARP15Q460N3 678 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 WDR45BQ5MNZ6 344 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 ATXN7L2Q5T6C5 722 aaPredicted RBP12.98□□□□□ -0.33
CD9-212ENST00000610354 KIAA0895LQ68EN5 471 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 ZCCHC9Q8N567 271 aaKnown RBP12.98□□□□□ -0.33
CD9-212ENST00000610354 NETO1Q8TDF5 533 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 ISG20Q96AZ6 181 aaKnown RBP12.98□□□□□ -0.33
CD9-212ENST00000610354 CSPG4P5Q96PW8 444 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 EDEM2Q9BV94 578 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.98□□□□□ -0.33
CD9-212ENST00000610354 LHX3Q9UBR4 397 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 IL36AQ9UHA7 158 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 SLC6A14Q9UN76 642 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 TP53BP1Q12888 1972 aaPredicted RBP12.98□□□□□ -0.33
CD9-212ENST00000610354 SHROOM3Q8TF72 1996 aa12.98□□□□□ -0.33
CD9-212ENST00000610354 FAM47DPA6NHR8 397 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 TMEM110-MUSTN1A8MSY1 372 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 WNT9AO14904 365 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 DAPK3O43293 454 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 FOXD2O60548 495 aaPredicted RBP12.97□□□□□ -0.33
CD9-212ENST00000610354 PRAMEF11O60813 436 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 LEFTY1O75610 366 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 FSBPO95073 299 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 CFIP05156 583 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 ENGP17813 658 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 DPP6P42658 865 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 DNA2P51530 1060 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 PPP2CBP62714 309 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 PPP2CAP67775 309 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 TCEAL1Q15170 157 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 SYCP2LQ5T4T6 812 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 PIP5KL1Q5T9C9 394 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 STPG1Q5TH74 334 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 FAM46CQ5VWP2 391 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 DSG4Q86SJ6 1040 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 ZNF354CQ86Y25 554 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 PLPP6Q8IY26 295 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 OR2I1PQ8NGU4 316 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 OR2T34Q8NGX1 318 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 OR6K2Q8NGY2 324 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 OR14C36Q8NHC7 312 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 CEP76Q8TAP6 659 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 GRIN3AQ8TCU5 1115 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 PANX2Q96RD6 677 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 HEPHQ9BQS7 1158 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 MIR1-1HGQ9H1L0 117 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 HPCAL4Q9UM19 191 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 TMEM131Q92545 1883 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 SPTBN2O15020 2390 aa12.97□□□□□ -0.33
CD9-212ENST00000610354 CACNA1AO00555 2505 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 ANKRD36A6QL64 1941 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 ZSCAN5CA6NGD5 496 aaPredicted RBP12.96□□□□□ -0.33
CD9-212ENST00000610354 C4orf47A7E2U8 309 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 C1QTNF3-AMACRE9PGA6 284 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 H3BRJ5 948 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 KPNA3O00505 521 aaPredicted RBP12.96□□□□□ -0.33
CD9-212ENST00000610354 INSIG1O15503 277 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 PLRG1O43660 514 aaKnown RBP12.96□□□□□ -0.33
CD9-212ENST00000610354 GSRP00390 522 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 PRNPP04156 253 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 MAN1A1P33908 653 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 SSR1P43307 286 aaKnown RBP12.96□□□□□ -0.33
CD9-212ENST00000610354 RGRP47804 291 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 ZNF135P52742 658 aaPredicted RBP12.96□□□□□ -0.33
CD9-212ENST00000610354 MESDQ14696 234 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 MYLK3Q32MK0 819 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.33
CD9-212ENST00000610354 OR2AP1Q8NGE2 309 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 SNX19Q92543 992 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 CCDC114Q96M63 670 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 NSMCE3Q96MG7 304 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 NUSAP1Q9BXS6 441 aaKnown RBP12.96□□□□□ -0.33
CD9-212ENST00000610354 TM9SF3Q9HD45 589 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 KLHL11Q9NVR0 708 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 INTUQ9ULD6 942 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 REXO2Q9Y3B8 237 aaKnown RBP12.96□□□□□ -0.33
CD9-212ENST00000610354 TRPM6Q9BX84 2022 aa12.96□□□□□ -0.33
CD9-212ENST00000610354 CABIN1Q9Y6J0 2220 aa12.96□□□□□ -0.34
CD9-212ENST00000610354 DNAH14Q0VDD8 3507 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 A0A1B0GTW7 788 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 DCDC2BA2VCK2 349 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 RCCD1A6NED2 376 aa12.95□□□□□ -0.34
CD9-212ENST00000610354 ARHGAP42A6NI28 874 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms