RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 H3BNX3 289 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 CPT1AP50416 773 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 AQP4P55087 323 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 HNRNPDQ14103 355 aaKnown RBP13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 PKN3Q6P5Z2 889 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 LINC00523Q86TU6 105 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 KBTBD6Q86V97 674 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 APLFQ8IW19 511 aaPredicted RBP13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 C2orf69Q8N8R5 385 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 DQX1Q8TE96 717 aaKnown RBP13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 NXNL1Q96CM4 212 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 MARK4Q96L34 752 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 KLHL4Q9C0H6 718 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 ATXN3LQ9H3M9 355 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 CSNK1G1Q9HCP0 422 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 NDFIP2Q9NV92 336 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 RRN3Q9NYV6 651 aa13.17□□□□□ -0.3
SRGAP2-209ENST00000604247 MYLKQ15746 1914 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 RGSL1A5PLK6 1076 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 CACNG3O60359 315 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 DLX3O60479 287 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 H2AFYO75367 372 aaKnown RBP13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 ZNF189O75820 626 aaPredicted RBP13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 CABYRO75952 493 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 DDHD2O94830 711 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 PGK1P00558 417 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 CTSHP09668 335 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 THRAP10827 490 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 ARNTP27540 789 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 CTGFP29279 349 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 DLG1Q12959 904 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 SLC12A1Q13621 1099 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 TRIP10Q15642 601 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 PCID2Q5JVF3 399 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 DENND5AQ6IQ26 1287 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 HASPINQ8TF76 798 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 STYXQ8WUJ0 223 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 JADE3Q92613 823 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 TMEM209Q96SK2 561 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 TBL1YQ9BQ87 522 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 XPR1Q9UBH6 696 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 NEU3Q9UQ49 428 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 ANKRD6Q9Y2G4 727 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 ACOT9Q9Y305 439 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 TMEM233B4DJY2 109 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 IGHA2P01877 340 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 APOA4P06727 396 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 GNAT1P11488 350 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 HADHAP40939 763 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 BRCC3P46736 316 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 PGFP49763 221 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 CNGA3Q16281 694 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 NXNQ6DKJ4 435 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 ZNF280DQ6N043 979 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 LRRC8EQ6NSJ5 796 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 AGMOQ6ZNB7 445 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 ARHGAP12Q8IWW6 846 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 SGF29Q96ES7 293 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 TSNARE1Q96NA8 513 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 CATSPER2Q96P56 530 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 CDRT15Q96T59 188 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 FICDQ9BVA6 458 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 SLC39A8Q9C0K1 460 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 AP5M1Q9H0R1 490 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 SFMBT1Q9UHJ3 866 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 NUDT5Q9UKK9 219 aa13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 AAR2Q9Y312 384 aaKnown RBP13.16□□□□□ -0.3
SRGAP2-209ENST00000604247 MAFKO60675 156 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 PMPCBO75439 489 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 FESP07332 822 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 CCNCP24863 283 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 ARCN1P48444 511 aaKnown RBP13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 PDCD2Q16342 344 aaPredicted RBP13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 UPP1Q16831 310 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 TSTD2Q5T7W7 516 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 LRRTM3Q86VH5 581 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 DSELQ8IZU8 1212 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 RNF148Q8N7C7 305 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 CCNYL1Q8N7R7 359 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 PNPLA1Q8N8W4 532 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 RDH11Q8TC12 318 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 GPR78Q96P69 363 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 TSGA13Q96PP4 275 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 ZDHHC7Q9NXF8 308 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 PDP2Q9P2J9 529 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 MID2Q9UJV3 735 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 FAM95CA0A1B0GW59 222 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 AURKAO14965 403 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 CFLARO15519 480 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 MSI1O43347 362 aaKnown RBP13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 B3GAT3O94766 335 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 POMCP01189 267 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 PCSK1P29120 753 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 CHRNA4P43681 627 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 RAB10P61026 200 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 IRX1P78414 480 aaPredicted RBP13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 PRKAA1Q13131 559 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 EML3Q32P44 896 aa13.15□□□□□ -0.3
SRGAP2-209ENST00000604247 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms