RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 PAK1Q13153 545 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 CDKN3Q16667 212 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 ISXQ2M1V0 245 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 CRTC1Q6UUV9 634 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 KYAT3Q6YP21 454 aaKnown RBP17.19■□□□□ 0.34
CCDC12-210ENST00000604181 ENOSF1Q7L5Y1 443 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 ZNF397Q8NF99 534 aaPredicted RBP17.19■□□□□ 0.34
CCDC12-210ENST00000604181 MAPK15Q8TD08 544 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 KCNE4Q8WWG9 221 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 TTC9Q92623 222 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 VOPP1Q96AW1 172 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 IFT43Q96FT9 208 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 KLF6Q99612 283 aaPredicted RBP17.19■□□□□ 0.34
CCDC12-210ENST00000604181 SLC17A9Q9BYT1 436 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 DYRK4Q9NR20 520 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 GGT7Q9UJ14 662 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 PNMA8BQ9ULN7 279 aaPredicted RBP17.19■□□□□ 0.34
CCDC12-210ENST00000604181 SATB2Q9UPW6 733 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 SSUH2Q9Y2M2 353 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 FARP1Q9Y4F1 1045 aaPredicted RBP17.19■□□□□ 0.34
CCDC12-210ENST00000604181 FADS3Q9Y5Q0 445 aa17.19■□□□□ 0.34
CCDC12-210ENST00000604181 SPTY2D1-AS1A0A0U1RR47 76 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 CSF2P04141 144 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 ALPPL2P10696 532 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 ADRB3P13945 408 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 NME1P15531 152 aaKnown RBP17.18■□□□□ 0.34
CCDC12-210ENST00000604181 RNASE9P60153 205 aaKnown RBP17.18■□□□□ 0.34
CCDC12-210ENST00000604181 ERVPABLB-1P60509 514 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 HNRNPKP61978 463 aaKnown RBP eCLIP17.18■□□□□ 0.349e-7■■□□□ 12.7
CCDC12-210ENST00000604181 SKOR1P84550 965 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 C3orf38Q5JPI3 329 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 TRNP1Q6NT89 227 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 PARS2Q7L3T8 475 aaKnown RBP17.18■□□□□ 0.34
CCDC12-210ENST00000604181 SLC47A2Q86VL8 602 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 ELOA2Q8IYF1 753 aaPredicted RBP17.18■□□□□ 0.34
CCDC12-210ENST00000604181 NT5C3BQ969T7 300 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 ATXN7L3BQ96GX2 97 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 CCDC114Q96M63 670 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 TBCBQ99426 244 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 TCEAL2Q9H3H9 227 aaPredicted RBP17.18■□□□□ 0.34
CCDC12-210ENST00000604181 WDCPQ9H6R7 721 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 SIX2Q9NPC8 291 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 APEX2Q9UBZ4 518 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 HOOK1Q9UJC3 728 aaKnown RBP17.18■□□□□ 0.34
CCDC12-210ENST00000604181 ENTPD2Q9Y5L3 495 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 HS3ST3A1Q9Y663 406 aa17.18■□□□□ 0.34
CCDC12-210ENST00000604181 IGLV3-10A0A075B6K4 115 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 CPED1A4D0V7 1026 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 J3QKU1 62 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 CD160O95971 181 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 GKP32189 559 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 CLCN1P35523 988 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 ABL2P42684 1182 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 SULT1E1P49888 294 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 CLCN6P51797 869 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 NEK3P51956 506 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 ARF5P84085 180 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 RHDQ02161 417 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 EIF2B5Q13144 721 aaKnown RBP17.17■□□□□ 0.34
CCDC12-210ENST00000604181 DEFB133Q30KQ1 61 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 BRMS1LQ5PSV4 323 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 PERM1Q5SV97 790 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 EFL1Q7Z2Z2 1120 aaKnown RBP17.17■□□□□ 0.34
CCDC12-210ENST00000604181 SETD3Q86TU7 594 aaPredicted RBP17.17■□□□□ 0.34
CCDC12-210ENST00000604181 RBFAQ8N0V3 343 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 LSMEM2Q8N112 164 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 ABCG4Q9H172 646 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 ITM2BQ9Y287 266 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 FCF1Q9Y324 198 aaKnown RBP17.17■□□□□ 0.34
CCDC12-210ENST00000604181 COL12A1Q99715 3063 aa17.17■□□□□ 0.34
CCDC12-210ENST00000604181 NEMP2A6NFY4 417 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 IGLON5A6NGN9 336 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 FOXN3O00409 490 aaPredicted RBP17.16■□□□□ 0.34
CCDC12-210ENST00000604181 ITGB7P26010 798 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 PON1P27169 355 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 L1CAMP32004 1257 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 SERPINH1P50454 418 aaKnown RBP17.16■□□□□ 0.34
CCDC12-210ENST00000604181 RPS21P63220 83 aaKnown RBP17.16■□□□□ 0.34
CCDC12-210ENST00000604181 C2CD6Q53TS8 623 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 BROXQ5VW32 411 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 KIAA1614Q5VZ46 1190 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 ZCCHC8Q6NZY4 707 aaKnown RBP17.16■□□□□ 0.34
CCDC12-210ENST00000604181 PARGQ86W56 976 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 IRF2BP1Q8IU81 584 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 SNRNP27Q8WVK2 155 aaKnown RBP17.16■□□□□ 0.34
CCDC12-210ENST00000604181 PGAP3Q96FM1 320 aaPredicted RBP17.16■□□□□ 0.34
CCDC12-210ENST00000604181 SPON2Q9BUD6 331 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 DUSP23Q9BVJ7 150 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 USP29Q9HBJ7 922 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC12-210ENST00000604181 CHD5Q8TDI0 1954 aa17.16■□□□□ 0.34
CCDC12-210ENST00000604181 EME2A4GXA9 379 aaPredicted RBP17.15■□□□□ 0.34
CCDC12-210ENST00000604181 AQP9O43315 295 aa17.15■□□□□ 0.34
CCDC12-210ENST00000604181 GCATO75600 419 aa17.15■□□□□ 0.34
CCDC12-210ENST00000604181 JUNDP17535 347 aa17.15■□□□□ 0.34
CCDC12-210ENST00000604181 OR1E1P30953 314 aa17.15■□□□□ 0.34
CCDC12-210ENST00000604181 FLT3P36888 993 aa17.15■□□□□ 0.34
CCDC12-210ENST00000604181 DUSP3P51452 185 aaPredicted RBP17.15■□□□□ 0.34
CCDC12-210ENST00000604181 DNA2P51530 1060 aa17.15■□□□□ 0.34
CCDC12-210ENST00000604181 CCNHP51946 323 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms