RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 EFTUD2Q15029 972 aaKnown RBP eCLIP22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 PCID2Q5JVF3 399 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 GPR158Q5T848 1215 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 CXorf57Q6NSI4 855 aaKnown RBP22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 CTAGE3PQ8IX95 158 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 SRRM1Q8IYB3 904 aaKnown RBP22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 IPMKQ8NFU5 416 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 OR7D4Q8NG98 312 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 ALKBH8Q96BT7 664 aaKnown RBP22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 MRGPRX2Q96LB1 330 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 SPON2Q9BUD6 331 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 FICDQ9BVA6 458 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 KIFC1Q9BW19 673 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 MRM3Q9HC36 420 aaKnown RBP22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 ATP13A1Q9HD20 1204 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 SMG5Q9UPR3 1016 aaKnown RBP22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 KRT37O76014 449 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 PAPLNO95428 1278 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 EPOP01588 193 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 AVPR1AP37288 418 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 ITKQ08881 620 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 MGAT5Q09328 741 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 RNF219Q5W0B1 726 aaPredicted RBP22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 DENND5AQ6IQ26 1287 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 MARK2Q7KZI7 788 aaKnown RBP22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 CMTM8Q8IZV2 173 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 PPM1NQ8N819 430 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 ARRDC2Q8TBH0 407 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 MTBPQ96DY7 904 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 PSKH2Q96QS6 385 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 SMC6Q96SB8 1091 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 TRABDQ9H4I3 376 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 HCFC1R1Q9NWW0 138 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 RPS6KL1Q9Y6S9 549 aa22.6■■□□□ 1.21
PPFIA3-211ENST00000602848 CXorf51AA0A1B0GTR3 108 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 PRPF4O43172 522 aaKnown RBP eCLIP22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 PMPCBO75439 489 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 RFPL2O75678 378 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 TCF3P15923 654 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 GBP2P32456 591 aaPredicted RBP22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 CCR2P41597 374 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 CRADDP78560 199 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 GUCY1A3Q02108 690 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 NIPAL4Q0D2K0 466 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 CERCAMQ5T4B2 595 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 RNF43Q68DV7 783 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 SPRED2Q7Z698 418 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 OR52K2Q8NGK3 314 aa22.59■■□□□ 1.21
PPFIA3-211ENST00000602848 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 MOSPD3O75425 235 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 KRT38O76015 456 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 MMP2P08253 660 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 CHN1P15882 459 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 CD86P42081 329 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 DNAJC3Q13217 504 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 ANKRD20A4Q4UJ75 823 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 INO80DQ53TQ3 878 aaPredicted RBP22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 PGBD5Q8N414 524 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 KIAA1958Q8N8K9 716 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 TDRD5Q8NAT2 981 aaKnown RBP22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 MZB1Q8WU39 189 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 MRRFQ96E11 262 aaKnown RBP22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 MGME1Q9BQP7 344 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 MUC3BQ9H195 1237 aa22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 INTS9Q9NV88 658 aaKnown RBP22.58■■□□□ 1.21
PPFIA3-211ENST00000602848 TMEM120BA0PK00 339 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 CYBBP04839 570 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 SNRPAP09012 282 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 GJA1P17302 382 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 ADRA1DP25100 572 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 LSP1P33241 339 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 OLIG2Q13516 323 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 RAB30Q15771 203 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 LRIT3Q3SXY7 679 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 PRSS36Q5K4E3 855 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 PKN3Q6P5Z2 889 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 TRMT10BQ6PF06 316 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 CARNMT1Q8N4J0 409 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 PPHLN1Q8NEY8 458 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 CERS2Q96G23 380 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 RANBP9Q96S59 729 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 APOL2Q9BQE5 337 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 FEM1AQ9BSK4 669 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 KCNK9Q9NPC2 374 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 PIH1D1Q9NWS0 290 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 NKIRAS1Q9NYS0 192 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 YBX2Q9Y2T7 364 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 LOC285095A0A1B0GVY8 99 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 CXorf49A8MYA2 514 aaPredicted RBP22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 ATP9BO43861 1147 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 CSPG5O95196 566 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 MT-ND3P03897 115 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 DSC2Q02487 901 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 LAMB3Q13751 1172 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 TEAD2Q15562 447 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 STXBP5Q5T5C0 1151 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 BBS7Q8IWZ6 715 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 SH3RF2Q8TEC5 729 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms