RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 RAB6CQ53S08 254 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 MANEALQ5VSG8 457 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 SEL1L3Q68CR1 1132 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 TRIM72Q6ZMU5 477 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 CLEC17AQ6ZS10 378 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 ABI3BPQ7Z7G0 1075 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 CACTIN-AS1Q8N1I8 211 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 OR13H1Q8NG92 308 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 ISG20Q96AZ6 181 aaKnown RBP17.32■□□□□ 0.36
SCAF1-204ENST00000601038 NXPE2Q96DL1 559 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 FEM1CQ96JP0 617 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 NRSN2Q9GZP1 204 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 RAB6CQ9H0N0 254 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 FZD3Q9NPG1 666 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 FAM207AQ9NSI2 230 aaPredicted RBP17.32■□□□□ 0.36
SCAF1-204ENST00000601038 FCF1Q9Y324 198 aaKnown RBP17.32■□□□□ 0.36
SCAF1-204ENST00000601038 HS3ST3A1Q9Y663 406 aa17.32■□□□□ 0.36
SCAF1-204ENST00000601038 RHOQP17081 205 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 ACVRL1P37023 503 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 PTPN9P43378 593 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 MAPKAPK2P49137 400 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 CCNHP51946 323 aaPredicted RBP17.31■□□□□ 0.36
SCAF1-204ENST00000601038 CLDN2P57739 230 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 HS1BP3Q53T59 392 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 FKBP15Q5T1M5 1219 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 KIAA1161Q6NSJ0 714 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 RWDD4Q6NW29 188 aaKnown RBP17.31■□□□□ 0.36
SCAF1-204ENST00000601038 GCNT7Q6ZNI0 430 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 STRADAQ7RTN6 431 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 PHLDB2Q86SQ0 1253 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 NLRP14Q86W24 1093 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 DCP2Q8IU60 420 aaKnown RBP17.31■□□□□ 0.36
SCAF1-204ENST00000601038 OR4C6Q8NH72 309 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 SLC30A5Q8TAD4 765 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 GPT2Q8TD30 523 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 RFFLQ8WZ73 363 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 CENPIQ92674 756 aaPredicted RBP17.31■□□□□ 0.36
SCAF1-204ENST00000601038 IFT43Q96FT9 208 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 C11orf70Q9BRQ4 267 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 CALN1Q9BXU9 219 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 SLC17A9Q9BYT1 436 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 NLRC4Q9NPP4 1024 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 HECAQ9UBI9 543 aaPredicted RBP17.31■□□□□ 0.36
SCAF1-204ENST00000601038 FADS3Q9Y5Q0 445 aa17.31■□□□□ 0.36
SCAF1-204ENST00000601038 A6NNZ2 444 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 FAM72CH0Y354 149 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 EPHB6O15197 1021 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 AP1G1O43747 822 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 PIAS2O75928 621 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 UNGP13051 313 aaPredicted RBP17.3■□□□□ 0.36
SCAF1-204ENST00000601038 STAT1P42224 750 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 GEMIN4P57678 1058 aaKnown RBP17.3■□□□□ 0.36
SCAF1-204ENST00000601038 E2F1Q01094 437 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 COL9A2Q14055 689 aaPredicted RBP17.3■□□□□ 0.36
SCAF1-204ENST00000601038 RTP5Q14D33 572 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 FAM72AQ5TYM5 149 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 FAM72DQ6L9T8 149 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 Q6ZSR6 202 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 ZSCAN30Q86W11 494 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 FAM72BQ86X60 149 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 JOSD2Q8TAC2 188 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 ARHGEF2Q92974 986 aaKnown RBP17.3■□□□□ 0.36
SCAF1-204ENST00000601038 LRIG1Q96JA1 1093 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 BMFQ96LC9 184 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 MAGEH1Q9H213 219 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 LMBRD1Q9NUN5 540 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 NDFIP2Q9NV92 336 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 TMEM248Q9NWD8 314 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 UCKL1Q9NWZ5 548 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 HPCAL4Q9UM19 191 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 SIK3Q9Y2K2 1263 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 ACTL7AQ9Y615 435 aa17.3■□□□□ 0.36
SCAF1-204ENST00000601038 MYLKQ15746 1914 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 TDRD6O60522 2096 aaKnown RBP17.29■□□□□ 0.36
SCAF1-204ENST00000601038 LRIG2O94898 1065 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 PAK4O96013 591 aaPredicted RBP17.29■□□□□ 0.36
SCAF1-204ENST00000601038 PLEKP08567 350 aaPredicted RBP17.29■□□□□ 0.36
SCAF1-204ENST00000601038 KRT3P12035 628 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 NSFP46459 744 aaKnown RBP17.29■□□□□ 0.36
SCAF1-204ENST00000601038 HDAC4P56524 1084 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 GSCP56915 257 aaPredicted RBP17.29■□□□□ 0.36
SCAF1-204ENST00000601038 INSM1Q01101 510 aaPredicted RBP17.29■□□□□ 0.36
SCAF1-204ENST00000601038 PTP4A2Q12974 167 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
SCAF1-204ENST00000601038 FGL2Q14314 439 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 SLC22A18ASQ8N1D0 253 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 RAB7BQ96AH8 199 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 PCDHB18PQ96TA0 734 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 MAGEB5Q9BZ81 275 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 TM6SF2Q9BZW4 377 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 ZDHHC6Q9H6R6 413 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 GPR27Q9NS67 375 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 FANCLQ9NW38 375 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 DNAI1Q9UI46 699 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 CLCA2Q9UQC9 943 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 AK5Q9Y6K8 562 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 CHD5Q8TDI0 1954 aa17.29■□□□□ 0.36
SCAF1-204ENST00000601038 DSPP15924 2871 aaKnown RBP17.29■□□□□ 0.36
SCAF1-204ENST00000601038 POM121BA6NF01 834 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 NEMP2A6NFY4 417 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms