RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 ALPK1Q96QP1 1244 aa16.32■□□□□ 0.2
SYDE1-204ENST00000600440 NTPCRQ9BSD7 190 aaKnown RBP16.32■□□□□ 0.2
SYDE1-204ENST00000600440 MTMR10Q9NXD2 777 aa16.32■□□□□ 0.2
SYDE1-204ENST00000600440 COX16Q9P0S2 106 aa16.32■□□□□ 0.2
SYDE1-204ENST00000600440 ADAMTSL1Q8N6G6 1762 aa16.32■□□□□ 0.2
SYDE1-204ENST00000600440 CLRN2A0PK11 232 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 LRPAP1P30533 357 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 PTPN9P43378 593 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 CLCQ05315 142 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 ABRAXAS1Q6UWZ7 409 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 VASH1Q7L8A9 365 aaPredicted RBP16.31■□□□□ 0.2
SYDE1-204ENST00000600440 EPHX4Q8IUS5 362 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 MCPH1Q8NEM0 835 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 KCTD4Q8WVF5 259 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 ANKRD36BP1Q96IX9 119 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 ING2Q9H160 280 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 RAD21L1Q9H4I0 556 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 PIF1Q9H611 641 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 SPAG4Q9NPE6 437 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 TLK1Q9UKI8 766 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 TNRC6CQ9HCJ0 1690 aaKnown RBP16.31■□□□□ 0.2
SYDE1-204ENST00000600440 SNAP91O60641 907 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 LYPLA2O95372 231 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 JAK3P52333 1124 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 SMUG1Q53HV7 270 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 PPP4R4Q6NUP7 873 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 HTRA1Q92743 480 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 CNPY3Q9BT09 278 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 MARCH7Q9H992 704 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 RIC8BQ9NVN3 520 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 UTP6Q9NYH9 597 aaKnown RBP16.31■□□□□ 0.2
SYDE1-204ENST00000600440 PKD2L2Q9NZM6 624 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 VPS28Q9UK41 221 aa16.31■□□□□ 0.2
SYDE1-204ENST00000600440 IQCA1LA6NCM1 817 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 XYLBO75191 536 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 DGAT1O75907 488 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 MICAL2O94851 1124 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 SNAP29O95721 258 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 C8BP07358 591 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 PSMB4P28070 264 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 SPRP35270 261 aaPredicted RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 GNL1P36915 607 aaPredicted RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 RPS3AP61247 264 aaKnown RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 CLDN10P78369 228 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 ARHGEF16Q5VV41 709 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 HHIPL2Q6UWX4 724 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 SHCBP1Q8NEM2 672 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 OR52K1Q8NGK4 314 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 FCRL3Q96P31 734 aaPredicted RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 UNC93B1Q9H1C4 597 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 PALMDQ9NP74 551 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 VTA1Q9NP79 307 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 CACNA2D2Q9NY47 1150 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 IFT80Q9P2H3 777 aaPredicted RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 SUCOQ9UBS9 1254 aaKnown RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 KLQ9UEF7 1012 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 SCAF8Q9UPN6 1271 aaKnown RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 RUVBL2Q9Y230 463 aaKnown RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 TLL2Q9Y6L7 1015 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 NEMP2A6NFY4 417 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 GPR25O00155 361 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 TADA2AO75478 443 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 SRP72O76094 671 aaKnown RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 POLBP06746 335 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 TSPAN8P19075 237 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 ZNF143P52747 638 aaPredicted RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 PLK1P53350 603 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 EMC2Q15006 297 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 FAM35AQ86V20 835 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 RNF135Q8IUD6 432 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 CCDC60Q8IWA6 550 aaPredicted RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 DHRSXQ8N5I4 330 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 ZNF420Q8TAQ5 688 aaPredicted RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 LRCH3Q96II8 777 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 VPS33BQ9H267 617 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 IPO11Q9UI26 975 aaKnown RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 UBIAD1Q9Y5Z9 338 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 BCLAF3A2AJT9 711 aaKnown RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 KRT75O95678 551 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 TPH1P17752 444 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 PGAM1P18669 254 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 MAGEA3P43357 314 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 PRKAA1Q13131 559 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 CAPRIN1Q14444 709 aaKnown RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 INSCQ1MX18 579 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 FAM183BPQ6ZVS7 135 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 CYP4V2Q6ZWL3 525 aaPredicted RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 SIX5Q8N196 739 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 CNTD1Q8N815 330 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 ABHD11Q8NFV4 315 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 MFSD3Q96ES6 412 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 CCDC90BQ9GZT6 254 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 NANOGQ9H9S0 305 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 IARS2Q9NSE4 1012 aaKnown RBP16.3■□□□□ 0.2
SYDE1-204ENST00000600440 OXSMQ9NWU1 459 aa16.3■□□□□ 0.2
SYDE1-204ENST00000600440 TMEM114B3SHH9 223 aa16.29■□□□□ 0.2
SYDE1-204ENST00000600440 FAM47E-STBD1D6RA91 191 aa16.29■□□□□ 0.2
SYDE1-204ENST00000600440 AP3B1O00203 1094 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms