RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 MYL1P05976 194 aa18.02■□□□□ 0.48
SSBP4-207ENST00000600244 ITGB7P26010 798 aa18.02■□□□□ 0.48
SSBP4-207ENST00000600244 UQCRFS1P47985 274 aa18.02■□□□□ 0.48
SSBP4-207ENST00000600244 PFN3P60673 137 aa18.02■□□□□ 0.48
SSBP4-207ENST00000600244 CAPRIN2Q6IMN6 1127 aaKnown RBP18.02■□□□□ 0.48
SSBP4-207ENST00000600244 GRAMD1CQ8IYS0 662 aa18.02■□□□□ 0.48
SSBP4-207ENST00000600244 SIX6OS1Q8N1H7 587 aa18.02■□□□□ 0.48
SSBP4-207ENST00000600244 TMIEQ8NEW7 156 aa18.02■□□□□ 0.48
SSBP4-207ENST00000600244 GPT2Q8TD30 523 aa18.02■□□□□ 0.48
SSBP4-207ENST00000600244 JPH3Q8WXH2 748 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-207ENST00000600244 ABHD17AQ96GS6 310 aa18.02■□□□□ 0.48
SSBP4-207ENST00000600244 CISHQ9NSE2 258 aa18.02■□□□□ 0.48
SSBP4-207ENST00000600244 APOBEC3BQ9UH17 382 aaKnown RBP18.02■□□□□ 0.48
SSBP4-207ENST00000600244 SDK2Q58EX2 2172 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 KPNA3O00505 521 aaPredicted RBP18.01■□□□□ 0.47
SSBP4-207ENST00000600244 KRT7P08729 469 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 CASP1P29466 404 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 CHRNA3P32297 505 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 DCTP40126 519 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 MAPK10P53779 464 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 MLLT10P55197 1068 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 RPS21P63220 83 aaKnown RBP18.01■□□□□ 0.47
SSBP4-207ENST00000600244 BST2Q10589 180 aaKnown RBP18.01■□□□□ 0.47
SSBP4-207ENST00000600244 CUL4BQ13620 913 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 GOLGA7BQ2TAP0 167 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 ERN2Q76MJ5 926 aaKnown RBP18.01■□□□□ 0.47
SSBP4-207ENST00000600244 PHACTR4Q8IZ21 702 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 TTC39CQ8N584 583 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 SH2D3CQ8N5H7 860 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 ARL10Q8N8L6 244 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 LENG8Q96PV6 779 aaPredicted RBP18.01■□□□□ 0.47
SSBP4-207ENST00000600244 CMKLR1Q99788 373 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 HDAC8Q9BY41 377 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 GULP1Q9UBP9 304 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 TSPAN16Q9UKR8 245 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 NAALADL1Q9UQQ1 740 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 TLR6Q9Y2C9 796 aa18.01■□□□□ 0.47
SSBP4-207ENST00000600244 CSMD1Q96PZ7 3565 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 A1L4Q6 167 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 STMND1H3BQB6 276 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 KLRC4O43908 158 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 PRR29P0C7W0 189 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 TSHRP16473 764 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 COL8A1P27658 744 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 ARSDP51689 593 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 DPYDQ12882 1025 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 KLRB1Q12918 225 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 NNTQ13423 1086 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 CXorf57Q6NSI4 855 aaKnown RBP18■□□□□ 0.47
SSBP4-207ENST00000600244 KIAA1161Q6NSJ0 714 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 UNC13DQ70J99 1090 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 CCAR2Q8N163 923 aaKnown RBP18■□□□□ 0.47
SSBP4-207ENST00000600244 KYQ8NBH2 561 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 OR2A12Q8NGT7 310 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 IRGQQ8WZA9 623 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 FAXDC2Q96IV6 333 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 CDH19Q9H159 772 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 SLC39A2Q9NP94 309 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 SLC25A13Q9UJS0 675 aa18■□□□□ 0.47
SSBP4-207ENST00000600244 PVALEFA0A1B0GWK0 134 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 AGRPO00253 132 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 FPGTO14772 594 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 BNIP3LO60238 219 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 SEMA7AO75326 666 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 FYNP06241 537 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 LCP1P13796 627 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 LIFP15018 202 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 TACR2P21452 398 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 PPP3CAQ08209 521 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 RAP1GAP2Q684P5 730 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 UBA3Q8TBC4 463 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 FEM1CQ96JP0 617 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 FEM1AQ9BSK4 669 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 BLZF1Q9H2G9 400 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 ZNF768Q9H5H4 540 aaKnown RBP17.99■□□□□ 0.47
SSBP4-207ENST00000600244 CUEDC1Q9NWM3 386 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-207ENST00000600244 OR51B4Q9Y5P0 310 aa17.99■□□□□ 0.47
SSBP4-207ENST00000600244 PRR19A6NJB7 356 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 MOCS2O96007 188 aaPredicted RBP17.98■□□□□ 0.47
SSBP4-207ENST00000600244 LTFP02788 710 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 CELA2BP08218 269 aaPredicted RBP17.98■□□□□ 0.47
SSBP4-207ENST00000600244 GNLYP22749 145 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 GCLMP48507 274 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 ATP1A2P50993 1020 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 LACTB2Q53H82 288 aaPredicted RBP17.98■□□□□ 0.47
SSBP4-207ENST00000600244 TMEM164Q5U3C3 297 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 LVRNQ6Q4G3 990 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 SLITRK4Q8IW52 837 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 OR52K2Q8NGK3 314 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 GPBAR1Q8TDU6 330 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 DQX1Q8TE96 717 aaKnown RBP17.98■□□□□ 0.47
SSBP4-207ENST00000600244 SERPINB11Q96P15 392 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 C1QTNF2Q9BXJ5 285 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 SLC13A1Q9BZW2 595 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 DYRK4Q9NR20 520 aa17.98■□□□□ 0.47
SSBP4-207ENST00000600244 OTOGQ6ZRI0 2925 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 ZNF891A8MT65 544 aaPredicted RBP17.97■□□□□ 0.47
SSBP4-207ENST00000600244 MBD3O95983 291 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 PRNPP04156 253 aa17.97■□□□□ 0.47
SSBP4-207ENST00000600244 SRCP12931 536 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms