RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 GPSM3Q9Y4H4 160 aa9.99□□□□□ -0.81
VRK3-216ENST00000599342 WASF2Q9Y6W5 498 aa9.99□□□□□ -0.81
VRK3-216ENST00000599342 PTPRBP23467 1997 aa9.99□□□□□ -0.81
VRK3-216ENST00000599342 PLXNB3Q9ULL4 1909 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 A6NNZ2 444 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 LGALS16A8MUM7 142 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 NEMP1O14524 444 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 RAMP2O60895 175 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 ZNF821O75541 412 aaPredicted RBP9.98□□□□□ -0.81
VRK3-216ENST00000599342 LRIG2O94898 1065 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 GJB6O95452 261 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 CCDC172P0C7W6 258 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 UNGP13051 313 aaPredicted RBP9.98□□□□□ -0.81
VRK3-216ENST00000599342 CKMT2P17540 419 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 GPD1P21695 349 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 L1CAMP32004 1257 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 ACVRL1P37023 503 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 RPS21P63220 83 aaKnown RBP9.98□□□□□ -0.81
VRK3-216ENST00000599342 DAB2P98082 770 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 CYP4F3Q08477 520 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 MAPK8IP2Q13387 824 aaPredicted RBP9.98□□□□□ -0.81
VRK3-216ENST00000599342 ILKQ13418 452 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 CAMK2BQ13554 666 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 CLEC16AQ2KHT3 1053 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 RAB6CQ53S08 254 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 EFHC2Q5JST6 749 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 ARTNQ5T4W7 220 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 HES3Q5TGS1 186 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 MANEALQ5VSG8 457 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 SEL1L3Q68CR1 1132 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 C19orf48Q6RUI8 117 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 KANSL1Q7Z3B3 1105 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 ZSCAN30Q86W11 494 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 NLRP14Q86W24 1093 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 CCDC185Q8N715 623 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 C3orf20Q8ND61 904 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 OR13H1Q8NG92 308 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 ARHGEF2Q92974 986 aaKnown RBP9.98□□□□□ -0.81
VRK3-216ENST00000599342 ISG20Q96AZ6 181 aaKnown RBP9.98□□□□□ -0.81
VRK3-216ENST00000599342 NXPE2Q96DL1 559 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 FEM1CQ96JP0 617 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 RAB6CQ9H0N0 254 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 MAGEH1Q9H213 219 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 KLHL11Q9NVR0 708 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 TMEM248Q9NWD8 314 aa9.98□□□□□ -0.81
VRK3-216ENST00000599342 HECAQ9UBI9 543 aaPredicted RBP9.98□□□□□ -0.81
VRK3-216ENST00000599342 ZFR2Q9UPR6 939 aaKnown RBP9.98□□□□□ -0.81
VRK3-216ENST00000599342 ZSCAN5CA6NGD5 496 aaPredicted RBP9.97□□□□□ -0.81
VRK3-216ENST00000599342 FAM72CH0Y354 149 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 RNF103O00237 685 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 FFAR2O15552 330 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 AP1G1O43747 822 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 PLEKP08567 350 aaPredicted RBP9.97□□□□□ -0.81
VRK3-216ENST00000599342 ALPPL2P10696 532 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 DGKAP23743 735 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 RFC1P35251 1148 aaPredicted RBP9.97□□□□□ -0.81
VRK3-216ENST00000599342 HDAC4P56524 1084 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 CLDN2P57739 230 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 SNRPD1P62314 119 aaKnown RBP9.97□□□□□ -0.81
VRK3-216ENST00000599342 SGCGQ13326 291 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 TMEM259Q4ZIN3 620 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 FAM72AQ5TYM5 149 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 FAM72DQ6L9T8 149 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 DNAJC24Q6P3W2 148 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 SCYL2Q6P3W7 929 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 GCNT7Q6ZNI0 430 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 Q6ZSR6 202 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 PARS2Q7L3T8 475 aaKnown RBP9.97□□□□□ -0.81
VRK3-216ENST00000599342 ABI3BPQ7Z7G0 1075 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 SLFN11Q7Z7L1 901 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 FAM72BQ86X60 149 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 PHF13Q86YI8 300 aaPredicted RBP9.97□□□□□ -0.81
VRK3-216ENST00000599342 PLPP6Q8IY26 295 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 OR2AP1Q8NGE2 309 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 OR6K2Q8NGY2 324 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 TSC1Q92574 1164 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 CENPIQ92674 756 aaPredicted RBP9.97□□□□□ -0.81
VRK3-216ENST00000599342 NTAN1Q96AB6 310 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 ARHGEF26Q96DR7 871 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 LRIG1Q96JA1 1093 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 MCEEQ96PE7 176 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 PCDHB18PQ96TA0 734 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 OSBPL1AQ9BXW6 950 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 SLC17A9Q9BYT1 436 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 NDFIP2Q9NV92 336 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 EVA1BQ9NVM1 165 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 LIMA1Q9UHB6 759 aaKnown RBP9.97□□□□□ -0.81
VRK3-216ENST00000599342 FADS3Q9Y5Q0 445 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 ACTL7AQ9Y615 435 aa9.97□□□□□ -0.81
VRK3-216ENST00000599342 NEMP2A6NFY4 417 aa9.96□□□□□ -0.82
VRK3-216ENST00000599342 SIGLEC16A6NMB1 481 aa9.96□□□□□ -0.82
VRK3-216ENST00000599342 H3BM21 787 aa9.96□□□□□ -0.82
VRK3-216ENST00000599342 KRIT1O00522 736 aa9.96□□□□□ -0.82
VRK3-216ENST00000599342 FPGTO14772 594 aa9.96□□□□□ -0.82
VRK3-216ENST00000599342 CCP110O43303 1012 aa9.96□□□□□ -0.82
VRK3-216ENST00000599342 TSPAN6O43657 245 aa9.96□□□□□ -0.82
VRK3-216ENST00000599342 BUB1O43683 1085 aa9.96□□□□□ -0.82
VRK3-216ENST00000599342 SIGLEC6O43699 453 aa9.96□□□□□ -0.82
VRK3-216ENST00000599342 CREB3O43889 395 aa9.96□□□□□ -0.82
VRK3-216ENST00000599342 PIAS2O75928 621 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms