RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 PLPP6Q8IY26 295 aa14.41□□□□□ -0.1
LIG1-218ENST00000599322 GRIN3AQ8TCU5 1115 aa14.41□□□□□ -0.1
LIG1-218ENST00000599322 CTNNBL1Q8WYA6 563 aaPredicted RBP14.41□□□□□ -0.1
LIG1-218ENST00000599322 SERAC1Q96JX3 654 aa14.41□□□□□ -0.1
LIG1-218ENST00000599322 GAREM1Q9H706 876 aa14.41□□□□□ -0.1
LIG1-218ENST00000599322 FSCN3Q9NQT6 498 aa14.41□□□□□ -0.1
LIG1-218ENST00000599322 DNAAF2Q9NVR5 837 aaKnown RBP14.41□□□□□ -0.1
LIG1-218ENST00000599322 ZNF212Q9UDV6 495 aa14.41□□□□□ -0.1
LIG1-218ENST00000599322 UPK3BL1B0FP48 263 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 UPK3BL2E5RIL1 263 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 H3BRJ5 948 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 PLRG1O43660 514 aaKnown RBP14.4□□□□□ -0.1
LIG1-218ENST00000599322 ZMPSTE24O75844 475 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 PCDH8O95206 1070 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 IGSF6O95976 241 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 GSRP00390 522 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 CD38P28907 300 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 CCNHP51946 323 aaPredicted RBP14.4□□□□□ -0.1
LIG1-218ENST00000599322 NEK3P51956 506 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 ARF5P84085 180 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 SHC2P98077 582 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 OGDHQ02218 1023 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 INO80DQ53TQ3 878 aaPredicted RBP14.4□□□□□ -0.1
LIG1-218ENST00000599322 ERN2Q76MJ5 926 aaKnown RBP14.4□□□□□ -0.1
LIG1-218ENST00000599322 UMODL1-AS1Q8N2C9 162 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 LZTR1Q8N653 840 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 PAF1Q8N7H5 531 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 OR2AP1Q8NGE2 309 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 ARHGEF26Q96DR7 871 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 GDAP1L1Q96MZ0 367 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 SNRNP25Q9BV90 132 aaKnown RBP14.4□□□□□ -0.1
LIG1-218ENST00000599322 NUP85Q9BW27 656 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 OSBPL1AQ9BXW6 950 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 TM6SF2Q9BZW4 377 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 ZDHHC6Q9H6R6 413 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 NDFIP2Q9NV92 336 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 CTTNBP2NLQ9P2B4 639 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 ANAPC7Q9UJX3 599 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 SARDHQ9UL12 918 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 ANKRD6Q9Y2G4 727 aa14.4□□□□□ -0.1
LIG1-218ENST00000599322 FCF1Q9Y324 198 aaKnown RBP14.4□□□□□ -0.1
LIG1-218ENST00000599322 A0A087X0T9 212 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 KRIT1O00522 736 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 NEMP1O14524 444 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 GIPC1O14908 333 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 VILLO15195 856 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 RNGTTO60942 597 aaKnown RBP14.39□□□□□ -0.11
LIG1-218ENST00000599322 LEFTY1O75610 366 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 IGHV4-34P06331 123 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 H2AFZP0C0S5 128 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 FAM228BP0C875 321 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 ZNF883P0CG24 379 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 XPAP23025 273 aaPredicted RBP14.39□□□□□ -0.11
LIG1-218ENST00000599322 HNRNPH3P31942 346 aaKnown RBP14.39□□□□□ -0.11
LIG1-218ENST00000599322 DRD3P35462 400 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 EIF4A3P38919 411 aaKnown RBP14.39□□□□□ -0.11
LIG1-218ENST00000599322 HCAR3P49019 387 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 RHOAP61586 193 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 SEMA3BQ13214 749 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 HLA-BQ31612 363 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 CFAP58Q5T655 872 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 NAPEPLDQ6IQ20 393 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 RFX8Q6ZV50 586 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 H2AFVQ71UI9 128 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 ZSCAN30Q86W11 494 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 DNAAF5Q86Y56 855 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 CNGA4Q8IV77 575 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 CHST14Q8NCH0 376 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 DEFB124Q8NES8 71 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 SETD7Q8WTS6 366 aaKnown RBP14.39□□□□□ -0.11
LIG1-218ENST00000599322 RAB7BQ96AH8 199 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 FEM1CQ96JP0 617 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 CCDC42Q96M95 316 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 HDAC8Q9BY41 377 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 MAGEB5Q9BZ81 275 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 TRIM5Q9C035 493 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 THAP2Q9H0W7 228 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 GDF3Q9NR23 364 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 TM7SF3Q9NS93 570 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 GPATCH2LQ9NWQ4 482 aa14.39□□□□□ -0.11
LIG1-218ENST00000599322 UBA2Q9UBT2 640 aaPredicted RBP14.39□□□□□ -0.11
LIG1-218ENST00000599322 PCNX2A6NKB5 2137 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 PRAMEF26H0Y7S4 382 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 LRCH4O75427 683 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 CYP1A2P05177 515 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 ITGB7P26010 798 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 MAT2AP31153 395 aaKnown RBP14.38□□□□□ -0.11
LIG1-218ENST00000599322 AKT2P31751 481 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 CCT8P50990 548 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 ZNF252P-AS1Q0IIN9 211 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 OVGP1Q12889 678 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 SERINC3Q13530 473 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 KRT81Q14533 505 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 GRM3Q14832 879 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 KIF19Q2TAC6 998 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 MYLK3Q32MK0 819 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 ZFYVE27Q5T4F4 411 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 TRIM69Q86WT6 500 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 VSTM4Q8IW00 320 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 OXR1Q8N573 874 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms