RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 RAMP2O60895 175 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 RNASEH2AO75792 299 aaKnown RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 SYF2O95926 243 aaKnown RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 H2AFZP0C0S5 128 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 GOT1P17174 413 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 MAOBP27338 520 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 SLC8A1P32418 973 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 ACSL1P33121 698 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 DNA2P51530 1060 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 GYS2P54840 703 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 PIGHQ14442 188 aaPredicted RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 POLD3Q15054 466 aaPredicted RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 CST6Q15828 149 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 CSRP2Q16527 193 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 TTC31Q49AM3 519 aaPredicted RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 TXNRD3NBQ6F5E7 133 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 ZNF783Q6ZMS7 281 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 PRR23CQ6ZRP0 262 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 H2AFVQ71UI9 128 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 METTL3Q86U44 580 aaKnown RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 RGL4Q8IZJ4 473 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 RTL3Q8N8U3 475 aaKnown RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 C12orf50Q8NA57 414 aaPredicted RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 AENQ8WTP8 325 aaKnown RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 CELF6Q96J87 481 aaKnown RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 OSBPL9Q96SU4 736 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 RUFY1Q96T51 708 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 PABPC3Q9H361 631 aaKnown RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 CATSPERBQ9H7T0 1116 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 FBRSQ9HAH7 460 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 OSGEPQ9NPF4 335 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 TMEM74BQ9NUR3 256 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 SERGEFQ9UGK8 458 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 IP6K2Q9UHH9 426 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 HS3ST2Q9Y278 367 aa12.32□□□□□ -0.44
ZNF548-209ENST00000598895 FCF1Q9Y324 198 aaKnown RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 RRP15Q9Y3B9 282 aaKnown RBP12.32□□□□□ -0.44
ZNF548-209ENST00000598895 DMDP11532 3685 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 USP34Q70CQ2 3546 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 GRID2IPA4D2P6 1211 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 RCCD1A6NED2 376 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 MYO1FO00160 1098 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 GDF9O60383 454 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 ZMPSTE24O75844 475 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 OXTRP30559 389 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 ELAVL3Q14576 367 aaKnown RBP12.31□□□□□ -0.44
ZNF548-209ENST00000598895 AASDHQ4L235 1098 aaPredicted RBP12.31□□□□□ -0.44
ZNF548-209ENST00000598895 RETSATQ6NUM9 610 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 C22orf39Q6P5X5 142 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 RFX8Q6ZV50 586 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 CREG2Q8IUH2 290 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 HDDC3Q8N4P3 179 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 CHST14Q8NCH0 376 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 SPATA4Q8NEY3 305 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 OR8D1Q8WZ84 308 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 SNX19Q92543 992 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 HMCESQ96FZ2 354 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 OMDQ99983 421 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 ACE2Q9BYF1 805 aaPredicted RBP12.31□□□□□ -0.44
ZNF548-209ENST00000598895 KLC2Q9H0B6 622 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 MIR1-1HGQ9H1L0 117 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 MAGEH1Q9H213 219 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 C6orf106Q9H6K1 298 aaPredicted RBP12.31□□□□□ -0.44
ZNF548-209ENST00000598895 NOL6Q9H6R4 1146 aaKnown RBP12.31□□□□□ -0.44
ZNF548-209ENST00000598895 FSCN3Q9NQT6 498 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 VPS45Q9NRW7 570 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 RXFP3Q9NSD7 469 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.31□□□□□ -0.44
ZNF548-209ENST00000598895 FBXL12Q9NXK8 326 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 FEZ2Q9UHY8 353 aaPredicted RBP12.31□□□□□ -0.44
ZNF548-209ENST00000598895 SARDHQ9UL12 918 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 NCKAP1Q9Y2A7 1128 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 PCDHGA5Q9Y5G8 931 aa12.31□□□□□ -0.44
ZNF548-209ENST00000598895 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.3□□□□□ -0.44
ZNF548-209ENST00000598895 GOLGA6CA6NDK9 693 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 RASA4BC9J798 803 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 MYO1CO00159 1063 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 RNF103O00237 685 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 CES2O00748 559 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 FGF10O15520 208 aaPredicted RBP12.3□□□□□ -0.44
ZNF548-209ENST00000598895 RASA4O43374 803 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 BUB1O43683 1085 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 SHOX2O60902 331 aaPredicted RBP12.3□□□□□ -0.44
ZNF548-209ENST00000598895 CD160O95971 181 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 IGLV3-19P01714 112 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 CFIP05156 583 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 TMEM253P0C7T8 217 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 ZNF806P0C7X5 589 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 GOLGA6DP0CG33 693 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 RARAP10276 462 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 ERCC2P18074 760 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 PCK1P35558 622 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 ETFBP38117 255 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 SERPINH1P50454 418 aaKnown RBP12.3□□□□□ -0.44
ZNF548-209ENST00000598895 ZBTB16Q05516 673 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 C2orf54Q08AI8 447 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 MESDQ14696 234 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 ACAP1Q15027 740 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 IFI16Q16666 785 aaKnown RBP12.3□□□□□ -0.44
ZNF548-209ENST00000598895 PLA2G2CQ5R387 149 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms