RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 K7ESM1 405 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 PES1O00541 588 aaKnown RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 SCAMP1O15126 338 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 OPA1O60313 960 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 USP12O75317 370 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 CSO75390 466 aaKnown RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 NEBLO76041 1014 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 GIMD1P0DJR0 217 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 ADRB3P13945 408 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 PRKCSHP14314 528 aaPredicted RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 L1CAMP32004 1257 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 GABRB2P47870 512 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 SERPINH1P50454 418 aaKnown RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 GABREP78334 506 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 TLE3Q04726 772 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 SLC20A2Q08357 652 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 SGCGQ13326 291 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 DRAP1Q14919 205 aaPredicted RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 MAN2A1Q16706 1144 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 CARD16Q5EG05 197 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 BROXQ5VW32 411 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 TAF3Q5VWG9 929 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 CDCP2Q5VXM1 449 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 SMYD5Q6GMV2 418 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 KIAA1161Q6NSJ0 714 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 IRF2BP1Q8IU81 584 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 FAM71AQ8IYT1 594 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 SLC22A18ASQ8N1D0 253 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 RYBPQ8N488 228 aaPredicted RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 PCDH20Q8N6Y1 951 aaKnown RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 LSM14AQ8ND56 463 aaKnown RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 ZNF248Q8NDW4 579 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 MAPK15Q8TD08 544 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 NT5C3BQ969T7 300 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 ZNF578Q96N58 590 aaPredicted RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 ZYG11BQ9C0D3 744 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 CEP44Q9C0F1 390 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 ZDHHC6Q9H6R6 413 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 TMEM51Q9NW97 253 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 FCF1Q9Y324 198 aaKnown RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 FADS3Q9Y5Q0 445 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 LOC400499M0QZD8 3231 aa10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 ARHGEF17Q96PE2 2063 aaPredicted RBP10.77□□□□□ -0.69
CHMP2A-202ENST00000596708 COL27A1Q8IZC6 1860 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 BPTFQ12830 3046 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 IGLV3-10A0A075B6K4 115 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 CPED1A4D0V7 1026 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 NEMP1O14524 444 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 FPGTO14772 594 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 RAD51BO15315 384 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 ZNF821O75541 412 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 GP1BAP07359 652 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 CYP11B1P15538 503 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 ITGB7P26010 798 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 CDH5P33151 784 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 FLT3P36888 993 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 RABIFP47224 123 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 CCNHP51946 323 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 PCBP4P57723 403 aaKnown RBP10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 ARF5P84085 180 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 GNA12Q03113 381 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 PDE1CQ14123 709 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 FGL2Q14314 439 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 FZD2Q14332 565 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 TMEM259Q4ZIN3 620 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 TAF1BQ53T94 588 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 C2CD6Q53TS8 623 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 KYAT3Q6YP21 454 aaKnown RBP10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 ZNF783Q6ZMS7 281 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 ZNF605Q86T29 641 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 FAM131BQ86XD5 332 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 XYLT1Q86Y38 959 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 FAM114A1Q8IWE2 563 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 DRC7Q8IY82 874 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 FAM181AQ8N9Y4 354 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 MSANTD4Q8NCY6 345 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 IFI44Q8TCB0 444 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 CFAP57Q96MR6 1250 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 HAPLN3Q96S86 360 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 TM6SF2Q9BZW4 377 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 NDST4Q9H3R1 872 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 USP29Q9HBJ7 922 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 HECAQ9UBI9 543 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 ACTL7AQ9Y615 435 aa10.76□□□□□ -0.69
CHMP2A-202ENST00000596708 ITPR1Q14643 2758 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 SPTY2D1-AS1A0A0U1RR47 76 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 IGLON5A6NGN9 336 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 ZMPSTE24O75844 475 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 C1QL1O75973 258 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 CSF2P04141 144 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 JUNDP17535 347 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 SCNN1AP37088 669 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 LSSP48449 732 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 ATP11AP98196 1134 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 CDKN3Q16667 212 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 CDO1Q16878 200 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 DEFB133Q30KQ1 61 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 VWA3BQ502W6 1294 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 HSP90AA4PQ58FG1 418 aa10.75□□□□□ -0.69
CHMP2A-202ENST00000596708 ARHGAP40Q5TG30 622 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms