RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CPOXP36551 454 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 ARCN1P48444 511 aaKnown RBP23.01■■□□□ 1.27
SRRM1-222ENST00000596378 GEMP55040 296 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 DSC1Q08554 894 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 PEX6Q13608 980 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 AFMIDQ63HM1 303 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 CEP97Q8IW35 865 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 SLC25A41Q8N5S1 370 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 NRG4Q8WWG1 115 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 SERPINB11Q96P15 392 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 CDH19Q9H159 772 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 TCAF1Q9Y4C2 921 aa23.01■■□□□ 1.27
SRRM1-222ENST00000596378 TBX10O75333 385 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 TM7SF2O76062 418 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 SLC1A2P43004 574 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 MLLT6P55198 1093 aaPredicted RBP23■■□□□ 1.27
SRRM1-222ENST00000596378 MAXP61244 160 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 TRIM68Q6AZZ1 485 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 COLGALT2Q8IYK4 626 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 PHTF2Q8N3S3 785 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 PNPLA1Q8N8W4 532 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 SCYL1Q96KG9 808 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 PPP1R36Q96LQ0 422 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 KLHL5Q96PQ7 755 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 TBC1D13Q9NVG8 400 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 OXSMQ9NWU1 459 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 RNF186Q9NXI6 227 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 SLC7A8Q9UHI5 535 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 RUVBL2Q9Y230 463 aaKnown RBP23■■□□□ 1.27
SRRM1-222ENST00000596378 ARHGEF37A1IGU5 675 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 TTC24A2A3L6 582 aaPredicted RBP23■■□□□ 1.27
SRRM1-222ENST00000596378 EIF4E1BA6NMX2 242 aaKnown RBP23■■□□□ 1.27
SRRM1-222ENST00000596378 CNTN5O94779 1100 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 MPSTP25325 297 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 TM4SF4P48230 202 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 PAXIP1Q6ZW49 1069 aaPredicted RBP23■■□□□ 1.27
SRRM1-222ENST00000596378 CENPLQ8N0S6 344 aaPredicted RBP23■■□□□ 1.27
SRRM1-222ENST00000596378 NUP93Q8N1F7 819 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 TDRD5Q8NAT2 981 aaKnown RBP23■■□□□ 1.27
SRRM1-222ENST00000596378 ATAD1Q8NBU5 361 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 STMN2Q93045 179 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 NAF1Q96HR8 494 aaKnown RBP23■■□□□ 1.27
SRRM1-222ENST00000596378 PANX3Q96QZ0 392 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 ABT1Q9ULW3 272 aaKnown RBP23■■□□□ 1.27
SRRM1-222ENST00000596378 SORCS3Q9UPU3 1222 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 VWA8A3KMH1 1905 aa23■■□□□ 1.27
SRRM1-222ENST00000596378 E9PBE3 544 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 J3KR12 359 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 INPPL1O15357 1258 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 KLHL41O60662 606 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 CST5P28325 142 aaPredicted RBP22.99■■□□□ 1.27
SRRM1-222ENST00000596378 EFEMP1Q12805 493 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 NAA25Q14CX7 972 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 ALFQ53S48 1182 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 CFAP157Q5JU67 520 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 PCSK9Q8NBP7 692 aaKnown RBP22.99■■□□□ 1.27
SRRM1-222ENST00000596378 SCML2Q9UQR0 700 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 LRRC42Q9Y546 428 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 WASF2Q9Y6W5 498 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 THSD7BQ9C0I4 1608 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 AURKAO14965 403 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 OAZ2O95190 189 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 KLHL2O95198 593 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 DNAJB2P25686 324 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 HTR7P34969 479 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 ACLYP53396 1101 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 PSMD5Q16401 504 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 DNAL1Q4LDG9 190 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 RALGPS1Q5JS13 557 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 TIGD7Q6NT04 549 aaPredicted RBP22.99■■□□□ 1.27
SRRM1-222ENST00000596378 TRAF7Q6Q0C0 670 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 RIPOR1Q6ZS17 1223 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 MON1AQ86VX9 555 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 HMCESQ96FZ2 354 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 NSMCE4AQ9NXX6 385 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 CDY1Q9Y6F8 540 aa22.99■■□□□ 1.27
SRRM1-222ENST00000596378 MIA3Q5JRA6 1907 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 FAM95CA0A1B0GW59 222 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 ZMPSTE24O75844 475 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 PEX11BO96011 259 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 HAPLN1P10915 354 aaPredicted RBP22.98■■□□□ 1.27
SRRM1-222ENST00000596378 PAX3P23760 479 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 ARPP19P56211 112 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 WNT3AP56704 352 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 TBX4P57082 545 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 VARS2Q5ST30 1063 aaKnown RBP22.98■■□□□ 1.27
SRRM1-222ENST00000596378 ZNF470Q6ECI4 717 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 EPGNQ6UW88 154 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 RANBP10Q6VN20 620 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 SLC24A5Q71RS6 500 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 CNTN4Q8IWV2 1026 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 FSTL5Q8N475 847 aaPredicted RBP22.98■■□□□ 1.27
SRRM1-222ENST00000596378 SLC39A13Q96H72 371 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 OR52B2Q96RD2 323 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 FAM167BQ9BTA0 163 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 NT5MQ9NPB1 228 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 ENTPD7Q9NQZ7 604 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 TLR6Q9Y2C9 796 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 GOLGA8QA0A0J9YX86 632 aa22.98■■□□□ 1.27
SRRM1-222ENST00000596378 LOC100653049A0A140TA62 436 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms