RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 KDELC1Q6UW63 502 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 PRPF39Q86UA1 669 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 ADIPOR2Q86V24 386 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 CAND1Q86VP6 1230 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 RELL1Q8IUW5 271 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 YAF2Q8IY57 180 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 CPA6Q8N4T0 437 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 DEFB123Q8N688 67 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 PDCD7Q8N8D1 485 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 PPP1R2P1Q96PQ5 205 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 XPO6Q96QU8 1125 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 TSPYL1Q9H0U9 437 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 LHX3Q9UBR4 397 aa14.98□□□□□ -0.01
SHKBP1-211ENST00000595945 TCF20Q9UGU0 1960 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 C2CD4DB7Z1M9 353 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 TRIM24O15164 1050 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 EIF3HO15372 352 aaKnown RBP eCLIP14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 TULP3O75386 442 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 ANXA9O76027 345 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 NEBLO76041 1014 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 MT-CO1P00395 513 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 SERPINH1P50454 418 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 GEMP55040 296 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 ARL4CP56559 192 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 GEMIN4P57678 1058 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 MAXP61244 160 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 DSC2Q02487 901 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 DHX9Q08211 1270 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 RUNX3Q13761 415 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 PRPSAP1Q14558 356 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 SLMAPQ14BN4 828 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 MSS51Q4VC12 460 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 FNBP1LQ5T0N5 605 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 LINGO4Q6UY18 593 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 PPP1R21Q6ZMI0 780 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 CEP128Q6ZU80 1094 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 AHI1Q8N157 1196 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 BBS5Q8N3I7 341 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 NAT16Q8N8M0 369 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 WFIKKN2Q8TEU8 576 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 GDAP1L1Q96MZ0 367 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 SERPINB12Q96P63 405 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 TRMT61BQ9BVS5 477 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 CINPQ9BW66 212 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 XAB2Q9HCS7 855 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 DNAJC17Q9NVM6 304 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 ZNF446Q9NWS9 450 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 NUMBLQ9Y6R0 609 aa14.97□□□□□ -0.01
SHKBP1-211ENST00000595945 E7EVH7 732 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 GOLGA8MH3BSY2 632 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 ALOX15BO15296 676 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 MLNP12872 115 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 CES1P23141 567 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 GDI1P31150 447 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 ADRA1AP35348 466 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 OPRD1P41143 372 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 CTSOP43234 321 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 RGRP47804 291 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 SLC6A11P48066 632 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 DGKGP49619 791 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 VASPP50552 380 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 SKOR1P84550 965 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 SULT2A1Q06520 285 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 NR1H3Q13133 447 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 MPP3Q13368 585 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 HIF1AQ16665 826 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 LEXMQ3ZCV2 418 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 SPDYCQ5MJ68 293 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 SYCP2LQ5T4T6 812 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 TMEM215Q68D42 235 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 MBLAC2Q68D91 279 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 LRRC8BQ6P9F7 803 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 PHTF2Q8N3S3 785 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 TSEN2Q8NCE0 465 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 SPATA22Q8NHS9 363 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 HLA-CQ95604 372 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 CHFRQ96EP1 664 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 RBM15Q96T37 977 aaKnown RBP eCLIP14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 PHF7Q9BWX1 381 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 POLR1EQ9GZS1 481 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 LRRC40Q9H9A6 602 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 CASS4Q9NQ75 786 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 VPS45Q9NRW7 570 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 HS3ST2Q9Y278 367 aa14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 AAR2Q9Y312 384 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-211ENST00000595945 GOLGA6CA6NDK9 693 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 GOLGA6BA6NDN3 693 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 SMAD6O43541 496 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 MT-CYBP00156 380 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 GOLGA6DP0CG33 693 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 GJA4P35212 333 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 GRIA1P42261 906 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 SARNPP82979 210 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 NSUN2Q08J23 767 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 SPARCL1Q14515 664 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 UAP1Q16222 522 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 GEN1Q17RS7 908 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 GRAMD4Q6IC98 578 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 CENPUQ71F23 418 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 METTL3Q86U44 580 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms