RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ITGA7Q13683 1181 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PTK2BQ14289 1009 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PSMD5Q16401 504 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 MGAT5BQ3V5L5 792 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 C6orf52Q5T4I8 152 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 ZNF772Q68DY9 489 aaPredicted RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 FSTL5Q8N475 847 aaPredicted RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 AFAP1L2Q8N4X5 818 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 ACVR1CQ8NER5 493 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PPTC7Q8NI37 304 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PPP1R14BQ96C90 147 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 PGAP3Q96FM1 320 aaPredicted RBP13.43□□□□□ -0.26
VRK3-209ENST00000594948 TEKT5Q96M29 485 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 TSGA13Q96PP4 275 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 MROH8Q9H579 483 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 APPL1Q9UKG1 709 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 CEPT1Q9Y6K0 416 aa13.43□□□□□ -0.26
VRK3-209ENST00000594948 A0A087X1B8 175 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 RBM47A0AV96 593 aaKnown RBP13.42□□□□□ -0.26
VRK3-209ENST00000594948 DLX3O60479 287 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 RNASEH2AO75792 299 aaKnown RBP13.42□□□□□ -0.26
VRK3-209ENST00000594948 AMHP03971 560 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 PDGFRBP09619 1106 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 NFKB1P19838 968 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 LMO2P25791 158 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 NMBRP28336 390 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 TKTP29401 623 aaKnown RBP13.42□□□□□ -0.26
VRK3-209ENST00000594948 RANBP1P43487 201 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 GTF2A2P52657 109 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 TPI1P60174 286 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 RAB10P61026 200 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 PSME3P61289 254 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 PITX1P78337 314 aaPredicted RBP13.42□□□□□ -0.26
VRK3-209ENST00000594948 CDC42EP1Q00587 391 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 RHDQ02161 417 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 OLIG2Q13516 323 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 SQLEQ14534 574 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 SMAD1Q15797 465 aaKnown RBP13.42□□□□□ -0.26
VRK3-209ENST00000594948 SV2CQ496J9 727 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 NXNQ6DKJ4 435 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 MAMDC4Q6UXC1 1216 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 HACD2Q6Y1H2 254 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 CENPLQ8N0S6 344 aaPredicted RBP13.42□□□□□ -0.26
VRK3-209ENST00000594948 APPL2Q8NEU8 664 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 KCTD4Q8WVF5 259 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 DPF3Q92784 378 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 USP13Q92995 863 aaPredicted RBP13.42□□□□□ -0.26
VRK3-209ENST00000594948 C18orf25Q96B23 403 aaPredicted RBP13.42□□□□□ -0.26
VRK3-209ENST00000594948 GPR78Q96P69 363 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 FTHL17Q9BXU8 183 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 CXCL16Q9H2A7 254 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 MRPL46Q9H2W6 279 aaKnown RBP13.42□□□□□ -0.26
VRK3-209ENST00000594948 PDGFCQ9NRA1 345 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 CHRAC1Q9NRG0 131 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 PIGVQ9NUD9 493 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 RRN3Q9NYV6 651 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 NCKIPSDQ9NZQ3 722 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 IPO11Q9UI26 975 aaKnown RBP13.42□□□□□ -0.26
VRK3-209ENST00000594948 PCDHGB4Q9UN71 923 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 PCDHGB5Q9Y5G0 923 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 PCDHGA7Q9Y5G6 932 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 AK5Q9Y6K8 562 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 PLXNB2O15031 1838 aa13.42□□□□□ -0.26
VRK3-209ENST00000594948 CCDC160A6NGH7 325 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 FAM155AB1AL88 458 aaPredicted RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 TRIM24O15164 1050 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 HCRTO43612 131 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 NPR3P17342 541 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 CDH2P19022 906 aaPredicted RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 TAF6P49848 677 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 TKTL1P51854 596 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 USP46P62068 366 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 COG7P83436 770 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 PCID2Q5JVF3 399 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 TMEM198Q66K66 360 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 IYDQ6PHW0 289 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 ARMCX2Q7L311 632 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 CARM1Q86X55 608 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 TP53INP2Q8IXH6 220 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 TOP6BLQ8N6T0 577 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 NETO2Q8NC67 525 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 B3GALNT2Q8NCR0 500 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 HM13Q8TCT9 377 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 PTCD2Q8WV60 388 aaKnown RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 EME1Q96AY2 570 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 CCDC126Q96EE4 140 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 MRPL57Q9BQC6 102 aaKnown RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 R3HDMLQ9H3Y0 253 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 WDR6Q9NNW5 1121 aaKnown RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 TMPRSS4Q9NRS4 437 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 FBXW11Q9UKB1 542 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 AP4S1Q9Y587 144 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 CSADQ9Y600 493 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 TCRBV3S1A0A5B6 114 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 TRMUO75648 421 aaKnown RBP13.41□□□□□ -0.26
VRK3-209ENST00000594948 FAM200BP0CF97 657 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 CDK4P11802 303 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 ATP6V1B1P15313 513 aa13.41□□□□□ -0.26
VRK3-209ENST00000594948 ATP5F1P24539 256 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms