RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 FSD1LQ9BXM9 530 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 CRISPLD1Q9H336 500 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 RHOJQ9H4E5 214 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 ZNF358Q9NW07 568 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 COMMD8Q9NX08 183 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 TCAF1Q9Y4C2 921 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 CCDC22O60826 627 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 KITP10721 976 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 CALB2P22676 271 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 ABCG1P45844 678 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 TAF10Q12962 218 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 ARMC3Q5W041 872 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 TFAP2DQ7Z6R9 452 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 PIWIL2Q8TC59 973 aaKnown RBP19.98■□□□□ 0.79
CLIP3-206ENST00000593074 HMCESQ96FZ2 354 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 NSL1Q96IY1 281 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 SLC25A51Q9H1U9 297 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 CAB39LQ9H9S4 337 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 TET1Q8NFU7 2136 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 GOLGA8TH3BQL2 631 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 NEBLO76041 1014 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 UPP2O95045 317 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 TBX18O95935 607 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 C2P06681 752 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 CPA3P15088 417 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 ARCN1P48444 511 aaKnown RBP19.97■□□□□ 0.79
CLIP3-206ENST00000593074 ALDH7A1P49419 539 aaKnown RBP19.97■□□□□ 0.79
CLIP3-206ENST00000593074 TLE2Q04725 743 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 DUSP4Q13115 394 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 DLG2Q15700 870 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 ALFQ53S48 1182 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 SWT1Q5T5J6 900 aaKnown RBP19.97■□□□□ 0.79
CLIP3-206ENST00000593074 KDELC1Q6UW63 502 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 ACVR1CQ8NER5 493 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 BCL7CQ8WUZ0 217 aaPredicted RBP19.97■□□□□ 0.79
CLIP3-206ENST00000593074 STN1Q9H668 368 aaKnown RBP19.97■□□□□ 0.79
CLIP3-206ENST00000593074 MARCH2Q9P0N8 246 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 ZNF212Q9UDV6 495 aa19.97■□□□□ 0.79
CLIP3-206ENST00000593074 CCDC78A2IDD5 438 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 CAPN14A8MX76 684 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 SIN3BO75182 1162 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 PMPCBO75439 489 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 LYPLA1O75608 230 aaPredicted RBP19.96■□□□□ 0.79
CLIP3-206ENST00000593074 CNTN5O94779 1100 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 ARNTP27540 789 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 RENBPP51606 427 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 IRF9Q00978 393 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 RING1Q06587 406 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 C10orf120Q5SQS8 335 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 ACBD5Q5T8D3 534 aaPredicted RBP19.96■□□□□ 0.79
CLIP3-206ENST00000593074 RASIP1Q5U651 963 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 PRSS55Q6UWB4 352 aaPredicted RBP19.96■□□□□ 0.79
CLIP3-206ENST00000593074 WDR75Q8IWA0 830 aaKnown RBP19.96■□□□□ 0.79
CLIP3-206ENST00000593074 AGAP11Q8TF27 550 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 IMP4Q96G21 291 aaKnown RBP19.96■□□□□ 0.79
CLIP3-206ENST00000593074 SORT1Q99523 831 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 MIPEPQ99797 713 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 ARNT2Q9HBZ2 717 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 TREX1Q9NSU2 369 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 DNAJC16Q9Y2G8 782 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 E2F8A0AVK6 867 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 RALBP11234 206 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 HARS2P49590 506 aaKnown RBP19.96■□□□□ 0.79
CLIP3-206ENST00000593074 TNK2Q07912 1038 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 GRM3Q14832 879 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 UGP2Q16851 508 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 FBXL22Q6P050 247 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.96■□□□□ 0.79
CLIP3-206ENST00000593074 LONP2Q86WA8 852 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 MIB1Q86YT6 1006 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 TOX2Q96NM4 488 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 BEGAINQ9BUH8 593 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 ATP13A1Q9HD20 1204 aa19.96■□□□□ 0.79
CLIP3-206ENST00000593074 DRGXA6NNA5 263 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 ZDHHC11BP0C7U3 371 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 GABRB3P28472 473 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 WNT3AP56704 352 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 IKBKEQ14164 716 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 TRIM60Q495X7 471 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 ESRP1Q6NXG1 681 aaKnown RBP19.95■□□□□ 0.78
CLIP3-206ENST00000593074 ZNF784Q8NCA9 323 aaPredicted RBP19.95■□□□□ 0.78
CLIP3-206ENST00000593074 FAM13CQ8NE31 585 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 FBXO22Q8NEZ5 403 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 IGSF8Q969P0 613 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 BTBD10Q9BSF8 475 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 ARMCX1Q9P291 453 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 RPL26L1Q9UNX3 145 aaKnown RBP19.95■□□□□ 0.78
CLIP3-206ENST00000593074 ANKRD6Q9Y2G4 727 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 CDY1Q9Y6F8 540 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 G3V2L1 256 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 J3KR12 359 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 VAPBO95292 243 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 AHSGP02765 367 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 CCND1P24385 295 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 ARRB2P32121 409 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 ABCE1P61221 599 aaKnown RBP19.95■□□□□ 0.78
CLIP3-206ENST00000593074 RAP1GAP2Q684P5 730 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 KIAA0930Q6ICG6 404 aaPredicted RBP19.95■□□□□ 0.78
CLIP3-206ENST00000593074 ATG14Q6ZNE5 492 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 LCA5Q86VQ0 697 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms