RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 STRADAQ7RTN6 431 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 MARCH9Q86YJ5 346 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 RYBPQ8N488 228 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-241ENST00000593048 JOSD2Q8TAC2 188 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 MDM1Q8TC05 714 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 FAM172AQ8WUF8 416 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 HEPHQ9BQS7 1158 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 HDAC8Q9BY41 377 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 RAB6CQ9H0N0 254 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 OSBPL2Q9H1P3 480 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 RETREG1Q9H6L5 497 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 ZNF212Q9UDV6 495 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 LIMA1Q9UHB6 759 aaKnown RBP16.47■□□□□ 0.23
CIRBP-241ENST00000593048 DNAI1Q9UI46 699 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 FCF1Q9Y324 198 aaKnown RBP16.47■□□□□ 0.23
CIRBP-241ENST00000593048 PCDHGA1Q9Y5H4 931 aa16.47■□□□□ 0.23
CIRBP-241ENST00000593048 ANKRD11Q6UB99 2663 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-241ENST00000593048 ANKRD62A6NC57 917 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 LGALS16A8MUM7 142 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 ZMPSTE24O75844 475 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 PLEKP08567 350 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-241ENST00000593048 THEGLP0DJG4 465 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 CDK4P11802 303 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 RHOQP17081 205 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 ACVRL1P37023 503 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 PTPN9P43378 593 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 MAPKAPK2P49137 400 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 ZNF75DP51815 510 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 NEK3P51956 506 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 GEMIN4P57678 1058 aaKnown RBP16.46■□□□□ 0.23
CIRBP-241ENST00000593048 ARF5P84085 180 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 NRG1Q02297 640 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-241ENST00000593048 DNAJC3Q13217 504 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 SMAD1Q15797 465 aaKnown RBP16.46■□□□□ 0.23
CIRBP-241ENST00000593048 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 ARTNQ5T4W7 220 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 FBXL19Q6PCT2 694 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 ZNF354CQ86Y25 554 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 TBC1D31Q96DN5 1066 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 PCDHB18PQ96TA0 734 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 ZDHHC6Q9H6R6 413 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 FZD3Q9NPG1 666 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 IMPACTQ9P2X3 320 aa16.46■□□□□ 0.23
CIRBP-241ENST00000593048 HECAQ9UBI9 543 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-241ENST00000593048 FREM2Q5SZK8 3169 aa16.46■□□□□ 0.22
CIRBP-241ENST00000593048 NYNRINQ9P2P1 1898 aaKnown RBP16.46■□□□□ 0.22
CIRBP-241ENST00000593048 TRABD2BA6NFA1 517 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 RNF103O00237 685 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 SDC3O75056 442 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 ZNF821O75541 412 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-241ENST00000593048 RFPL3O75679 317 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 LRIG2O94898 1065 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 CAPNS1P04632 268 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 C1SP09871 688 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 CCDC172P0C7W6 258 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 JUPP14923 745 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 GPD1P21695 349 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 HNRNPA2B1P22626 353 aaKnown RBP16.45■□□□□ 0.22
CIRBP-241ENST00000593048 RFC1P35251 1148 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-241ENST00000593048 CCNHP51946 323 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-241ENST00000593048 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-241ENST00000593048 POLD3Q15054 466 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-241ENST00000593048 ZNF284Q2VY69 593 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 SCYL2Q6P3W7 929 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 SLFN11Q7Z7L1 901 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 TMPRSS12Q86WS5 348 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 PHF13Q86YI8 300 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-241ENST00000593048 CCDC185Q8N715 623 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 ARHGEF2Q92974 986 aaKnown RBP16.45■□□□□ 0.22
CIRBP-241ENST00000593048 FEM1CQ96JP0 617 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 CALN1Q9BXU9 219 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 TM6SF2Q9BZW4 377 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 NDFIP2Q9NV92 336 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 TMEM248Q9NWD8 314 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 ACTL7AQ9Y615 435 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 WASF2Q9Y6W5 498 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 CABIN1Q9Y6J0 2220 aa16.45■□□□□ 0.22
CIRBP-241ENST00000593048 FAM72CH0Y354 149 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 RAMP2O60895 175 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 ADRB3P13945 408 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 DESP17661 470 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 ITGB7P26010 798 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 L1CAMP32004 1257 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 HNF1BP35680 557 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 HDAC4P56524 1084 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 GSCP56915 257 aaPredicted RBP16.44■□□□□ 0.22
CIRBP-241ENST00000593048 RPS21P63220 83 aaKnown RBP16.44■□□□□ 0.22
CIRBP-241ENST00000593048 CYP4F3Q08477 520 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 PTP4A2Q12974 167 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 FAM72AQ5TYM5 149 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 MANEALQ5VSG8 457 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 SEL1L3Q68CR1 1132 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 FAM72DQ6L9T8 149 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 DNAJC24Q6P3W2 148 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 WDR59Q6PJI9 974 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 NLRP14Q86W24 1093 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 FAM72BQ86X60 149 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 PDCD7Q8N8D1 485 aaKnown RBP16.44■□□□□ 0.22
CIRBP-241ENST00000593048 TMEM145Q8NBT3 493 aa16.44■□□□□ 0.22
CIRBP-241ENST00000593048 C3orf20Q8ND61 904 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms