RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CNOT8Q9UFF9 292 aaKnown RBP14.14□□□□□ -0.15
APOC1-208ENST00000592535 HPCAL4Q9UM19 191 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 DMTF1Q9Y222 760 aa14.14□□□□□ -0.15
APOC1-208ENST00000592535 MAP1BP46821 2468 aaKnown RBP14.14□□□□□ -0.15
APOC1-208ENST00000592535 A0A1B0GTQ1 180 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 A0A1W2PQU0 124 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 TMEM191CA6NGB0 347 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 WASH4PA8MWX3 477 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 GOLGA6L19H0YKK7 550 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 KDELR3O43731 214 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 PCDHGA12O60330 932 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 FTH1P19P0C7X4 201 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 NUDT1P36639 197 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 GEMIN4P57678 1058 aaKnown RBP14.13□□□□□ -0.15
APOC1-208ENST00000592535 NXPH1P58417 271 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 SUZ12Q15022 739 aaKnown RBP14.13□□□□□ -0.15
APOC1-208ENST00000592535 CA9Q16790 459 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 ZSCAN23Q3MJ62 389 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 SETMARQ53H47 684 aaPredicted RBP14.13□□□□□ -0.15
APOC1-208ENST00000592535 SLC45A4Q5BKX6 768 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 HGSNATQ68CP4 663 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 ZNF354CQ86Y25 554 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 RYBPQ8N488 228 aaPredicted RBP14.13□□□□□ -0.15
APOC1-208ENST00000592535 ARFGAP1Q8N6T3 406 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 OR6K2Q8NGY2 324 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 RHBDD1Q8TEB9 315 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 KLK6Q92876 244 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 ISG20Q96AZ6 181 aaKnown RBP14.13□□□□□ -0.15
APOC1-208ENST00000592535 ZNF653Q96CK0 615 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 HMCESQ96FZ2 354 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 PPP1R16AQ96I34 528 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 PEBP4Q96S96 227 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 ELF4Q99607 663 aaPredicted RBP14.13□□□□□ -0.15
APOC1-208ENST00000592535 HDAC8Q9BY41 377 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 KLC2Q9H0B6 622 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 ZDHHC6Q9H6R6 413 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 CATSPERBQ9H7T0 1116 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 MYO1AQ9UBC5 1043 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 HECAQ9UBI9 543 aaPredicted RBP14.13□□□□□ -0.15
APOC1-208ENST00000592535 KLK13Q9UKR3 277 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 AP4E1Q9UPM8 1137 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 CA5BQ9Y2D0 317 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 PTPRBP23467 1997 aa14.13□□□□□ -0.15
APOC1-208ENST00000592535 A0A1W2PQJ5 194 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 RASA4BC9J798 803 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 TLR4O00206 839 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 RASA4O43374 803 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 BUB1O43683 1085 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 DFNA5O60443 496 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 PCDH8O95206 1070 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 PRLRP16471 622 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 PTMSP20962 102 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 ITGB7P26010 798 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 GKP32189 559 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 NEK3P51956 506 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 YBEYP58557 167 aaPredicted RBP14.12□□□□□ -0.15
APOC1-208ENST00000592535 TPI1P60174 286 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 CCDC15Q0P6D6 951 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 SHBQ15464 509 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 TDRD12Q587J7 1177 aaKnown RBP14.12□□□□□ -0.15
APOC1-208ENST00000592535 NEK5Q6P3R8 708 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 PARS2Q7L3T8 475 aaKnown RBP14.12□□□□□ -0.15
APOC1-208ENST00000592535 GLRX5Q86SX6 157 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 HORMAD1Q86X24 394 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 GATAD2AQ86YP4 633 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 PLPP6Q8IY26 295 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 CHCHD4Q8N4Q1 142 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 PNPLA1Q8N8W4 532 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 MFSD2AQ8NA29 543 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 NETO2Q8NC67 525 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 VOPP1Q96AW1 172 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 MYOCQ99972 504 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 SNRNP25Q9BV90 132 aaKnown RBP14.12□□□□□ -0.15
APOC1-208ENST00000592535 ISCUQ9H1K1 167 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 DHX35Q9H5Z1 703 aaKnown RBP14.12□□□□□ -0.15
APOC1-208ENST00000592535 GDF3Q9NR23 364 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 PCSK1NQ9UHG2 260 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 ZFR2Q9UPR6 939 aaKnown RBP14.12□□□□□ -0.15
APOC1-208ENST00000592535 CHD8Q9HCK8 2581 aa14.12□□□□□ -0.15
APOC1-208ENST00000592535 ZSCAN5CA6NGD5 496 aaPredicted RBP14.11□□□□□ -0.15
APOC1-208ENST00000592535 C1QTNF9BB2RNN3 333 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 PRAMEF26H0Y7S4 382 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 KRIT1O00522 736 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 SLC31A1O15431 190 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 FGF10O15520 208 aaPredicted RBP14.11□□□□□ -0.15
APOC1-208ENST00000592535 TMCC1O94876 653 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 TRIM16O95361 564 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 GSRP00390 522 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 C1QTNF9P0C862 333 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 ADRB3P13945 408 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 MIPP30301 263 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 GRK6P43250 576 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 SNRPD1P62314 119 aaKnown RBP14.11□□□□□ -0.15
APOC1-208ENST00000592535 STAT4Q14765 748 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 ST3GAL2Q16842 350 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 ZNF284Q2VY69 593 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 ATXN7L2Q5T6C5 722 aaPredicted RBP14.11□□□□□ -0.15
APOC1-208ENST00000592535 ERMARDQ5T6L9 678 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 SEL1L3Q68CR1 1132 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 CYP4V2Q6ZWL3 525 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms