RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 GOLGA6L19H0YKK7 550 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 LRCH4O75427 683 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 CD38P28907 300 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 MAT2AP31153 395 aaKnown RBP20.54■□□□□ 0.88
CIRBP-239ENST00000592467 SIM1P81133 766 aaPredicted RBP20.54■□□□□ 0.88
CIRBP-239ENST00000592467 SKOR2Q2VWA4 1001 aaPredicted RBP20.54■□□□□ 0.88
CIRBP-239ENST00000592467 NAPEPLDQ6IQ20 393 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 ERN2Q76MJ5 926 aaKnown RBP20.54■□□□□ 0.88
CIRBP-239ENST00000592467 GLRX5Q86SX6 157 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 HMCESQ96FZ2 354 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 SERAC1Q96JX3 654 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 EPAS1Q99814 870 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 TM6SF2Q9BZW4 377 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 LRRC19Q9H756 370 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 AP4E1Q9UPM8 1137 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 ZFR2Q9UPR6 939 aaKnown RBP20.54■□□□□ 0.88
CIRBP-239ENST00000592467 BTBD3Q9Y2F9 522 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 AKAP13Q12802 2813 aa20.54■□□□□ 0.88
CIRBP-239ENST00000592467 CEP295Q9C0D2 2601 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 RASA4BC9J798 803 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 RASA4O43374 803 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 RNGTTO60942 597 aaKnown RBP20.53■□□□□ 0.88
CIRBP-239ENST00000592467 SERPING1P05155 500 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 MYBL1P10243 752 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 ITGB7P26010 798 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 MIPP30301 263 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 GKP32189 559 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 HTR7P34969 479 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 RECQLP46063 649 aaPredicted RBP20.53■□□□□ 0.88
CIRBP-239ENST00000592467 YBEYP58557 167 aaPredicted RBP20.53■□□□□ 0.88
CIRBP-239ENST00000592467 FOXC1Q12948 553 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 SERINC3Q13530 473 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 HNRNPDQ14103 355 aaKnown RBP20.53■□□□□ 0.88
CIRBP-239ENST00000592467 ZNF284Q2VY69 593 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 ERMARDQ5T6L9 678 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 NEK5Q6P3R8 708 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 PRPF39Q86UA1 669 aaKnown RBP20.53■□□□□ 0.88
CIRBP-239ENST00000592467 CPLX3Q8WVH0 158 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 KCTD15Q96SI1 283 aaPredicted RBP20.53■□□□□ 0.88
CIRBP-239ENST00000592467 XPO4Q9C0E2 1151 aaKnown RBP20.53■□□□□ 0.88
CIRBP-239ENST00000592467 CATSPERBQ9H7T0 1116 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 AASDHPPTQ9NRN7 309 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 HECAQ9UBI9 543 aaPredicted RBP20.53■□□□□ 0.88
CIRBP-239ENST00000592467 PCSK1NQ9UHG2 260 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 DMTF1Q9Y222 760 aa20.53■□□□□ 0.88
CIRBP-239ENST00000592467 BZW2Q9Y6E2 419 aaKnown RBP20.53■□□□□ 0.88
CIRBP-239ENST00000592467 ASPMQ8IZT6 3477 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 A0A087X0T9 212 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 A0A1B0GTQ1 180 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 FGF10O15520 208 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-239ENST00000592467 PCDHGA12O60330 932 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 GSRP00390 522 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 FAM228BP0C875 321 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 SPINK2P20155 84 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 NUDT1P36639 197 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 GEMIN4P57678 1058 aaKnown RBP20.52■□□□□ 0.88
CIRBP-239ENST00000592467 NXPH1P58417 271 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 TRIP6Q15654 476 aaKnown RBP20.52■□□□□ 0.88
CIRBP-239ENST00000592467 PRAMEF14Q5SWL7 426 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 PARS2Q7L3T8 475 aaKnown RBP20.52■□□□□ 0.88
CIRBP-239ENST00000592467 ADAT2Q7Z6V5 191 aaKnown RBP20.52■□□□□ 0.88
CIRBP-239ENST00000592467 SPATS2Q86XZ4 545 aaKnown RBP20.52■□□□□ 0.88
CIRBP-239ENST00000592467 MFSD2AQ8NA29 543 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 TMEM145Q8NBT3 493 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 OR2AP1Q8NGE2 309 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 OR6K2Q8NGY2 324 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 IQCDQ96DY2 449 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 TRIM11Q96F44 468 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 TMEM121BQ9BXQ6 578 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-239ENST00000592467 THAP2Q9H0W7 228 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 DHX35Q9H5Z1 703 aaKnown RBP20.52■□□□□ 0.88
CIRBP-239ENST00000592467 PDFQ9HBH1 243 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 MYO1AQ9UBC5 1043 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 HPCAL4Q9UM19 191 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 SCINQ9Y6U3 715 aa20.52■□□□□ 0.88
CIRBP-239ENST00000592467 TRPM6Q9BX84 2022 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 COL5A1P20908 1838 aaPredicted RBP20.51■□□□□ 0.87
CIRBP-239ENST00000592467 A0A1W2PQU0 124 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 ZSCAN5CA6NGD5 496 aaPredicted RBP20.51■□□□□ 0.87
CIRBP-239ENST00000592467 EIF3CLB5ME19 914 aaKnown RBP20.51■□□□□ 0.87
CIRBP-239ENST00000592467 FLRT2O43155 660 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 SPINT1O43278 529 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 TMCC1O94876 653 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 ADRB3P13945 408 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 TCF4P15884 667 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 IL1R2P27930 398 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 HNRNPH3P31942 346 aaKnown RBP20.51■□□□□ 0.87
CIRBP-239ENST00000592467 DNA2P51530 1060 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 C21orf59P57076 290 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 TPI1P60174 286 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 PARP15Q460N3 678 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 TMEM259Q4ZIN3 620 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 INO80DQ53TQ3 878 aaPredicted RBP20.51■□□□□ 0.87
CIRBP-239ENST00000592467 TDRD12Q587J7 1177 aaKnown RBP20.51■□□□□ 0.87
CIRBP-239ENST00000592467 AFMIDQ63HM1 303 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 HORMAD1Q86X24 394 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 PSTKQ8IV42 348 aaKnown RBP20.51■□□□□ 0.87
CIRBP-239ENST00000592467 NETO2Q8NC67 525 aa20.51■□□□□ 0.87
CIRBP-239ENST00000592467 ELF4Q99607 663 aaPredicted RBP20.51■□□□□ 0.87
CIRBP-239ENST00000592467 EIF3CQ99613 913 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms