RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 NT5C1AQ9BXI3 368 aa6.6□□□□□ -1.35
DNMT1-222ENST00000590619 C1QTNF2Q9BXJ5 285 aa6.6□□□□□ -1.35
DNMT1-222ENST00000590619 HDAC8Q9BY41 377 aa6.6□□□□□ -1.35
DNMT1-222ENST00000590619 ULBP1Q9BZM6 244 aa6.6□□□□□ -1.35
DNMT1-222ENST00000590619 SLC13A1Q9BZW2 595 aa6.6□□□□□ -1.35
DNMT1-222ENST00000590619 NUCKS1Q9H1E3 243 aaKnown RBP6.6□□□□□ -1.35
DNMT1-222ENST00000590619 RDH14Q9HBH5 336 aa6.6□□□□□ -1.35
DNMT1-222ENST00000590619 AKAP7Q9P0M2 348 aaPredicted RBP6.6□□□□□ -1.35
DNMT1-222ENST00000590619 GPR34Q9UPC5 381 aa6.6□□□□□ -1.35
DNMT1-222ENST00000590619 DOLKQ9UPQ8 538 aa6.6□□□□□ -1.35
DNMT1-222ENST00000590619 KCTD3Q9Y597 815 aa6.6□□□□□ -1.35
DNMT1-222ENST00000590619 CCDC168Q8NDH2 2452 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 IGHV5-10-1A0A0J9YXX1 117 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 FRMD3A2A2Y4 597 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 IGLON5A6NGN9 336 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 TULP2O00295 520 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 KPNA3O00505 521 aaPredicted RBP6.59□□□□□ -1.35
DNMT1-222ENST00000590619 CLIC2O15247 247 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 BNIP3LO60238 219 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 ABCB7O75027 752 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 IDEP14735 1019 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 PDGFRAP16234 1089 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 GLB1P16278 677 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 F8A1P23610 371 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 ASPAP45381 313 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 CLDN10P78369 228 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 MC1RQ01726 317 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 PPARDQ03181 441 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 SULT2A1Q06520 285 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 SGCGQ13326 291 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 BIRC3Q13489 604 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 TCEA2Q15560 299 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 RILPL1Q5EBL4 403 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 ARSIQ5FYB1 569 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 NYAP1Q6ZVC0 841 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 Q6ZVU0 165 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 SPRED1Q7Z699 444 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 TMEM135Q86UB9 458 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 NLGN4XQ8N0W4 816 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 FSTL5Q8N475 847 aaPredicted RBP6.59□□□□□ -1.35
DNMT1-222ENST00000590619 NLGN4YQ8NFZ3 816 aaPredicted RBP6.59□□□□□ -1.35
DNMT1-222ENST00000590619 STARD8Q92502 1023 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 ERCC4Q92889 916 aaPredicted RBP6.59□□□□□ -1.35
DNMT1-222ENST00000590619 CENPTQ96BT3 561 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 C19orf60Q96EN9 201 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 DDA1Q9BW61 102 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 EDEM3Q9BZQ6 932 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 PANK4Q9NVE7 773 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.59□□□□□ -1.35
DNMT1-222ENST00000590619 OCIAD1Q9NX40 245 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 SLC39A1Q9NY26 324 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 LRIT1Q9P2V4 623 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 FADS3Q9Y5Q0 445 aa6.59□□□□□ -1.35
DNMT1-222ENST00000590619 MRPS18BQ9Y676 258 aaKnown RBP6.59□□□□□ -1.35
DNMT1-222ENST00000590619 NIPBLQ6KC79 2804 aaeCLIP6.58□□□□□ -1.36
DNMT1-222ENST00000590619 M0QYT0 321 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 HGSO14964 777 aaPredicted RBP6.58□□□□□ -1.36
DNMT1-222ENST00000590619 KRT86O43790 486 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 MT-CO1P00395 513 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 RPN1P04843 607 aaKnown RBP6.58□□□□□ -1.36
DNMT1-222ENST00000590619 P4HA1P13674 534 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 GJB2P29033 226 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 EIF4A3P38919 411 aaKnown RBP6.58□□□□□ -1.36
DNMT1-222ENST00000590619 HK3P52790 923 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 THOP1P52888 689 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 TBX4P57082 545 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 OR1D5P58170 312 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 ABHD18Q0P651 414 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 INCA1Q0VD86 236 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 SLC12A1Q13621 1099 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 ERV3-1Q14264 604 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 ELOCQ15369 112 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 AMZ1Q400G9 498 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 CERCAMQ5T4B2 595 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 DCAF12Q5T6F0 453 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 ANKS6Q68DC2 871 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 KIAA1161Q6NSJ0 714 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 SV2BQ7L1I2 683 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 LGI2Q8N0V4 545 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 Q8NA96 180 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 ANKRD52Q8NB46 1076 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 XXYLT1Q8NBI6 393 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 CHST14Q8NCH0 376 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 OR52K2Q8NGK3 314 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 OR2A12Q8NGT7 310 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 RASSF8Q8NHQ8 419 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 ZNF507Q8TCN5 953 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 PARD3BQ8TEW8 1205 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 ASB12Q8WXK4 309 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 TSACCQ96A04 125 aaPredicted RBP6.58□□□□□ -1.36
DNMT1-222ENST00000590619 KIAA1143Q96AT1 154 aaPredicted RBP6.58□□□□□ -1.36
DNMT1-222ENST00000590619 EPSTI1Q96J88 318 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 FCRL2Q96LA5 508 aaPredicted RBP6.58□□□□□ -1.36
DNMT1-222ENST00000590619 RANBP9Q96S59 729 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 DDX50Q9BQ39 737 aaKnown RBP6.58□□□□□ -1.36
DNMT1-222ENST00000590619 NUDT22Q9BRQ3 303 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 LLPHQ9BRT6 129 aaKnown RBP6.58□□□□□ -1.36
DNMT1-222ENST00000590619 MFRPQ9BY79 579 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 ASPSCR1Q9BZE9 553 aa6.58□□□□□ -1.36
DNMT1-222ENST00000590619 INTS2Q9H0H0 1204 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms