RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 LAG3P18627 525 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 MARCKSP29966 332 aaPredicted RBP8.21□□□□□ -1.1
ATG4D-210ENST00000588972 CCT6AP40227 531 aaKnown RBP8.21□□□□□ -1.1
ATG4D-210ENST00000588972 PRPHP41219 470 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 BECN1Q14457 450 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 SLC29A2Q14542 456 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 UBXN2BQ14CS0 331 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 PTPAQ15257 358 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 ZRSR1Q15695 479 aaKnown RBP8.21□□□□□ -1.1
ATG4D-210ENST00000588972 FAM214AQ32MH5 1076 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 XKR9Q5GH70 373 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 FAM26FQ5R3K3 315 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 EFCAB12Q6NXP0 572 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 CRTC1Q6UUV9 634 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 RSRC2Q7L4I2 434 aaKnown RBP8.21□□□□□ -1.1
ATG4D-210ENST00000588972 PPP1R32Q7Z5V6 425 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 LINC01465Q8N7H1 131 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 FAM46DQ8NEK8 389 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 ERMNQ8TAM6 284 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 MBD6Q96DN6 1003 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 KLHL32Q96NJ5 620 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 USP28Q96RU2 1077 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 TCF25Q9BQ70 676 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 VKORC1Q9BQB6 163 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 MMTAG2Q9BU76 263 aaKnown RBP8.21□□□□□ -1.1
ATG4D-210ENST00000588972 POLR3CQ9BUI4 534 aaPredicted RBP8.21□□□□□ -1.1
ATG4D-210ENST00000588972 PCDHAC1Q9H158 963 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 S1PR5Q9H228 398 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 FAM53CQ9NYF3 392 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 IFT80Q9P2H3 777 aaPredicted RBP8.21□□□□□ -1.1
ATG4D-210ENST00000588972 PCDHB7Q9Y5E2 793 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 IRAK3Q9Y616 596 aa8.21□□□□□ -1.1
ATG4D-210ENST00000588972 TPRP12270 2363 aaKnown RBP8.21□□□□□ -1.1
ATG4D-210ENST00000588972 A0A0B4J269 797 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 IGKV6-21A0A0C4DH24 114 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 LOC102723971A0A1B0GUV8 181 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 SH3D21A4FU49 640 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 CDHR4A6H8M9 788 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 C2CD4DB7Z1M9 353 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 E9PMD0 336 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 DKC1O60832 514 aaKnown RBP eCLIP8.2□□□□□ -1.1
ATG4D-210ENST00000588972 RPS6KA5O75582 802 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 KIF20AO95235 890 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 LYPLA2O95372 231 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 FDXRP22570 491 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 CNTFP26441 200 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 RPA1P27694 616 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 RARRES1P49788 294 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 POLGP54098 1239 aaPredicted RBP8.2□□□□□ -1.1
ATG4D-210ENST00000588972 ITIH3Q06033 890 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 EMC2Q15006 297 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 MAPKAPK3Q16644 382 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 MLANAQ16655 118 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 BMT2Q1RMZ1 405 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 SPECC1Q5M775 1068 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 HAUS3Q68CZ6 603 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 CES5AQ6NT32 575 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 RETSATQ6NUM9 610 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 SYCE2Q6PIF2 218 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 TMTC1Q8IUR5 882 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 TDRD5Q8NAT2 981 aaKnown RBP8.2□□□□□ -1.1
ATG4D-210ENST00000588972 SLC30A5Q8TAD4 765 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 ASB12Q8WXK4 309 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 MRPS27Q92552 414 aaKnown RBP8.2□□□□□ -1.1
ATG4D-210ENST00000588972 CASP10Q92851 521 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 TMEM143Q96AN5 459 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 BORCS6Q96GS4 357 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 PWWP2AQ96N64 755 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 MAP7D2Q96T17 732 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 PLIN2Q99541 437 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 PRPF18Q99633 342 aaKnown RBP8.2□□□□□ -1.1
ATG4D-210ENST00000588972 SIK2Q9H0K1 926 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 MFSD1Q9H3U5 465 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 ZSCAN16Q9H4T2 348 aaPredicted RBP8.2□□□□□ -1.1
ATG4D-210ENST00000588972 TUFT1Q9NNX1 390 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 XPNPEP1Q9NQW7 623 aa8.2□□□□□ -1.1
ATG4D-210ENST00000588972 MRPS18AQ9NVS2 196 aaKnown RBP8.2□□□□□ -1.1
ATG4D-210ENST00000588972 ACACBO00763 2458 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 MYO10Q9HD67 2058 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 PMS2P1A4D2B8 440 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 C9orf118A6NHY6 69 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 HIDE1A8MVS5 230 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 TISP43B9A030 160 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 B9A039 149 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 MAGEB2O15479 319 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 USO1O60763 962 aaKnown RBP8.19□□□□□ -1.1
ATG4D-210ENST00000588972 CSDE1O75534 798 aaKnown RBP8.19□□□□□ -1.1
ATG4D-210ENST00000588972 INMTO95050 263 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 BMP15O95972 392 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 POLBP06746 335 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 FGFR4P22455 802 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 GPC3P51654 580 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 CLCN5P51795 746 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 WNT3P56703 355 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 NLRP11P59045 1033 aaKnown RBP8.19□□□□□ -1.1
ATG4D-210ENST00000588972 MPP1Q00013 466 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 PDIA5Q14554 519 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 TMTC4Q5T4D3 741 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 KRT79Q5XKE5 535 aa8.19□□□□□ -1.1
ATG4D-210ENST00000588972 RAP1GAP2Q684P5 730 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms