RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 ZNF677Q86XU0 584 aa16.24■□□□□ 0.19
ERCC1-206ENST00000588300 DCP2Q8IU60 420 aaKnown RBP16.24■□□□□ 0.19
ERCC1-206ENST00000588300 DRC7Q8IY82 874 aa16.24■□□□□ 0.19
ERCC1-206ENST00000588300 EMC1Q8N766 993 aa16.24■□□□□ 0.19
ERCC1-206ENST00000588300 IFT43Q96FT9 208 aa16.24■□□□□ 0.19
ERCC1-206ENST00000588300 SAMSN1Q9NSI8 373 aaKnown RBP16.24■□□□□ 0.19
ERCC1-206ENST00000588300 UCKL1Q9NWZ5 548 aa16.24■□□□□ 0.19
ERCC1-206ENST00000588300 CHMP5Q9NZZ3 219 aa16.24■□□□□ 0.19
ERCC1-206ENST00000588300 HS3ST3A1Q9Y663 406 aa16.24■□□□□ 0.19
ERCC1-206ENST00000588300 FASNP49327 2511 aaKnown RBP16.23■□□□□ 0.19
ERCC1-206ENST00000588300 FFAR2O15552 330 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 RRP8O43159 456 aaKnown RBP16.23■□□□□ 0.19
ERCC1-206ENST00000588300 TLX3O43711 291 aaPredicted RBP16.23■□□□□ 0.19
ERCC1-206ENST00000588300 L1CAMP32004 1257 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 EIF2S3P41091 472 aaKnown RBP16.23■□□□□ 0.19
ERCC1-206ENST00000588300 CCNHP51946 323 aaPredicted RBP16.23■□□□□ 0.19
ERCC1-206ENST00000588300 RPS21P63220 83 aaKnown RBP16.23■□□□□ 0.19
ERCC1-206ENST00000588300 CDO1Q16878 200 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 ARL13BQ3SXY8 428 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 TCP11X2Q5H9J9 407 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 ZSCAN30Q86W11 494 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 SLC22A18ASQ8N1D0 253 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 DCBLD1Q8N8Z6 715 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 BAP1Q92560 729 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 CRELD1Q96HD1 420 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 FEM1CQ96JP0 617 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 SLC17A9Q9BYT1 436 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 NUP62CLQ9H1M0 184 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 ZDHHC6Q9H6R6 413 aa16.23■□□□□ 0.19
ERCC1-206ENST00000588300 FCF1Q9Y324 198 aaKnown RBP16.23■□□□□ 0.19
ERCC1-206ENST00000588300 CHD5Q8TDI0 1954 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 CXorf51AA0A1B0GTR3 108 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 NEMP2A6NFY4 417 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 EIF4E1BA6NMX2 242 aaKnown RBP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 AP1G1O43747 822 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 MT-CO3P00414 261 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 SDC4P31431 198 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 MAPKAPK2P49137 400 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 GEMIN4P57678 1058 aaKnown RBP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 HNRNPKP61978 463 aaKnown RBP eCLIP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 NRG1Q02297 640 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 CT47A1Q5JQC4 288 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 KYAT3Q6YP21 454 aaKnown RBP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 Q6ZSR6 202 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 PARS2Q7L3T8 475 aaKnown RBP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 TMC6Q7Z403 805 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 SNIP1Q8TAD8 396 aaKnown RBP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 SLC20A1Q8WUM9 679 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 ISG20Q96AZ6 181 aaKnown RBP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 BBC3Q96PG8 261 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 RETREG1Q9H6L5 497 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 DNAJC28Q9NX36 388 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 TAB2Q9NYJ8 693 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 NLGN3Q9NZ94 848 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 OR12D3Q9UGF7 316 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 NOCTQ9UK39 431 aaKnown RBP16.22■□□□□ 0.19
ERCC1-206ENST00000588300 FADS3Q9Y5Q0 445 aa16.22■□□□□ 0.19
ERCC1-206ENST00000588300 LOC400499M0QZD8 3231 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 GFPT2O94808 682 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 PAK4O96013 591 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-206ENST00000588300 CYP1A1P04798 512 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-206ENST00000588300 CKMT1AP12532 417 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 MMP8P22894 467 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 ITPKBP27987 946 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 ADRA1BP35368 520 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 CDR2Q01850 454 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 MANEALQ5VSG8 457 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 RWDD4Q6NW29 188 aaKnown RBP16.21■□□□□ 0.19
ERCC1-206ENST00000588300 KDM7AQ6ZMT4 941 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 PLPP6Q8IY26 295 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 RYBPQ8N488 228 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-206ENST00000588300 RXFP2Q8WXD0 754 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 BMFQ96LC9 184 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 APOLD1Q96LR9 279 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 DUSP23Q9BVJ7 150 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 TM6SF2Q9BZW4 377 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 GANQ9H2C0 597 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 GPR27Q9NS67 375 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 EVA1BQ9NVM1 165 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 HECAQ9UBI9 543 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-206ENST00000588300 ACTL7AQ9Y615 435 aa16.21■□□□□ 0.19
ERCC1-206ENST00000588300 POM121BA6NF01 834 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 H3BM21 787 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 SCAMP1O15126 338 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 TSPAN6O43657 245 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 BRINP1O60477 761 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 CD160O95971 181 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 TPM2P07951 284 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 GIMD1P0DJR0 217 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 RHOQP17081 205 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 ACTN2P35609 894 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 ACVRL1P37023 503 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 RABIFP47224 123 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 DUSP3P51452 185 aaPredicted RBP16.2■□□□□ 0.18
ERCC1-206ENST00000588300 FMO1Q01740 532 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 SGCGQ13326 291 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 FGL2Q14314 439 aa16.2■□□□□ 0.18
ERCC1-206ENST00000588300 POLD3Q15054 466 aaPredicted RBP16.2■□□□□ 0.18
ERCC1-206ENST00000588300 C15orf59Q2T9L4 293 aaPredicted RBP16.2■□□□□ 0.18
ERCC1-206ENST00000588300 CCDC14Q49A88 953 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms