RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TSC1Q92574 1164 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 CENPIQ92674 756 aaPredicted RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 CEP44Q9C0F1 390 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 OSBPL2Q9H1P3 480 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 ZDHHC6Q9H6R6 413 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 SEPT11Q9NVA2 429 aaKnown RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 ANO10Q9NW15 660 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 HECAQ9UBI9 543 aaPredicted RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 LIMA1Q9UHB6 759 aaKnown RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 NEU3Q9UQ49 428 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 GPSM3Q9Y4H4 160 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 PCDHGA1Q9Y5H4 931 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 ZFYVE26Q68DK2 2539 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 TMEM131Q92545 1883 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 TRIM38O00635 465 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 JUPP14923 745 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 RHOQP17081 205 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 HNRNPA2B1P22626 353 aaKnown RBP14.61□□□□□ -0.07
VMP1-206ENST00000587945 PTPN9P43378 593 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 NEK3P51956 506 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 MYL5Q02045 173 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 NRG1Q02297 640 aaPredicted RBP14.61□□□□□ -0.07
VMP1-206ENST00000587945 FGL2Q14314 439 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 TMEM259Q4ZIN3 620 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 WDR59Q6PJI9 974 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 GCNT7Q6ZNI0 430 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 PARS2Q7L3T8 475 aaKnown RBP14.61□□□□□ -0.07
VMP1-206ENST00000587945 STRADAQ7RTN6 431 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 TMPRSS12Q86WS5 348 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 PYROXD2Q8N2H3 581 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 SLC25A45Q8N413 288 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 RYBPQ8N488 228 aaPredicted RBP14.61□□□□□ -0.07
VMP1-206ENST00000587945 NETO2Q8NC67 525 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 ARHGEF2Q92974 986 aaKnown RBP14.61□□□□□ -0.07
VMP1-206ENST00000587945 TBC1D31Q96DN5 1066 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 PPP1R16AQ96I34 528 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 SELENOOQ9BVL4 669 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 CALN1Q9BXU9 219 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 KLHL11Q9NVR0 708 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 TMEM248Q9NWD8 314 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 UCKL1Q9NWZ5 548 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 FADS3Q9Y5Q0 445 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 CELSR3Q9NYQ7 3312 aa14.61□□□□□ -0.07
VMP1-206ENST00000587945 RAD51BO15315 384 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 SIGLEC6O43699 453 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 PAK4O96013 591 aaPredicted RBP14.6□□□□□ -0.07
VMP1-206ENST00000587945 ADRB3P13945 408 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 CDK11BP21127 795 aaKnown RBP14.6□□□□□ -0.07
VMP1-206ENST00000587945 GPD1P21695 349 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 ITGB7P26010 798 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 L1CAMP32004 1257 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 MAPKAPK2P49137 400 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 NCAPHQ15003 741 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 STX1AQ16623 288 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 COL28A1Q2UY09 1125 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 ZNF542PQ5EBM4 170 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 HES3Q5TGS1 186 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 FBXL19Q6PCT2 694 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 MON1BQ7L1V2 547 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 APTXQ7Z2E3 356 aaKnown RBP14.6□□□□□ -0.07
VMP1-206ENST00000587945 PHF13Q86YI8 300 aaPredicted RBP14.6□□□□□ -0.07
VMP1-206ENST00000587945 SLC22A18ASQ8N1D0 253 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 PDCD7Q8N8D1 485 aaKnown RBP14.6□□□□□ -0.07
VMP1-206ENST00000587945 ANKRD20A12PQ8NF67 263 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 HNRNPLLQ8WVV9 542 aaKnown RBP14.6□□□□□ -0.07
VMP1-206ENST00000587945 BMFQ96LC9 184 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 GBP4Q96PP9 640 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 HSD3B7Q9H2F3 369 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 DAAM1Q9Y4D1 1078 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 PLXNB3Q9ULL4 1909 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 FAM208BQ5VWN6 2430 aa14.6□□□□□ -0.07
VMP1-206ENST00000587945 POM121BA6NF01 834 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 SIGLEC16A6NMB1 481 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 FFAR2O15552 330 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 CCP110O43303 1012 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 RAMP2O60895 175 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 CALB1P05937 261 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 C1SP09871 688 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 CKMT2P17540 419 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 DGKAP23743 735 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 ETFBP38117 255 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 ABL2P42684 1182 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 GSCP56915 257 aaPredicted RBP14.59□□□□□ -0.07
VMP1-206ENST00000587945 RPS21P63220 83 aaKnown RBP14.59□□□□□ -0.07
VMP1-206ENST00000587945 TARDBPQ13148 414 aaKnown RBP eCLIP14.59□□□□□ -0.07
VMP1-206ENST00000587945 PROX2Q3B8N5 592 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 ATXN7L2Q5T6C5 722 aaPredicted RBP14.59□□□□□ -0.07
VMP1-206ENST00000587945 SCYL2Q6P3W7 929 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 KDM7AQ6ZMT4 941 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 Q6ZSR6 202 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 PTAR1Q7Z6K3 402 aaPredicted RBP14.59□□□□□ -0.07
VMP1-206ENST00000587945 ABI3BPQ7Z7G0 1075 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 C3orf20Q8ND61 904 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 NTAN1Q96AB6 310 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 VOPP1Q96AW1 172 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 ISG20Q96AZ6 181 aaKnown RBP14.59□□□□□ -0.07
VMP1-206ENST00000587945 ERGIC2Q96RQ1 377 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 AGPAT1Q99943 283 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 SLC17A9Q9BYT1 436 aa14.59□□□□□ -0.07
VMP1-206ENST00000587945 MAGEH1Q9H213 219 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms