RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 PREBQ9HCU5 417 aa16.41■□□□□ 0.22
CXXC1-209ENST00000587342 TOR4AQ9NXH8 423 aa16.41■□□□□ 0.22
CXXC1-209ENST00000587342 ZFR2Q9UPR6 939 aaKnown RBP16.41■□□□□ 0.22
CXXC1-209ENST00000587342 A0A1B0GTQ1 180 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 A0A1W2PQU0 124 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 ANKRD62A6NC57 917 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 C1QTNF9BB2RNN3 333 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 SPINT1O43278 529 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 RNGTTO60942 597 aaKnown RBP16.4■□□□□ 0.22
CXXC1-209ENST00000587342 C1QTNF9P0C862 333 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 GZMAP12544 262 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 PSMA2P25787 234 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 CCT8P50990 548 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 DNA2P51530 1060 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 C21orf59P57076 290 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 NXPH1P58417 271 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 SLC20A2Q08357 652 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 POLD3Q15054 466 aaPredicted RBP16.4■□□□□ 0.22
CXXC1-209ENST00000587342 ZNF284Q2VY69 593 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 ATXN7L2Q5T6C5 722 aaPredicted RBP16.4■□□□□ 0.22
CXXC1-209ENST00000587342 SEL1L3Q68CR1 1132 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 ERN2Q76MJ5 926 aaKnown RBP16.4■□□□□ 0.22
CXXC1-209ENST00000587342 PARS2Q7L3T8 475 aaKnown RBP16.4■□□□□ 0.22
CXXC1-209ENST00000587342 SLCO6A1Q86UG4 719 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 PNPLA1Q8N8W4 532 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 TMEM145Q8NBT3 493 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 KLK6Q92876 244 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 ZNF653Q96CK0 615 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 MYOCQ99972 504 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 HEPHQ9BQS7 1158 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 SNRNP25Q9BV90 132 aaKnown RBP16.4■□□□□ 0.22
CXXC1-209ENST00000587342 HDAC8Q9BY41 377 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 EDEM3Q9BZQ6 932 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 RETREG1Q9H6L5 497 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 FZD3Q9NPG1 666 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 PARVAQ9NVD7 372 aa16.4■□□□□ 0.22
CXXC1-209ENST00000587342 CNOT8Q9UFF9 292 aaKnown RBP16.4■□□□□ 0.22
CXXC1-209ENST00000587342 CXorf51AA0A1B0GTR3 108 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 A0A1W2PQJ5 194 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 WASH4PA8MWX3 477 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 RASA4BC9J798 803 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 FLRT2O43155 660 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 RASA4O43374 803 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 KDELR3O43731 214 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 PCDHGA12O60330 932 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 TCF4P15884 667 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 ITGB7P26010 798 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 ETFBP38117 255 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 ABL2P42684 1182 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 RECQLP46063 649 aaPredicted RBP16.39■□□□□ 0.21
CXXC1-209ENST00000587342 FGL2Q14314 439 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 RAB44Q7Z6P3 723 aaPredicted RBP16.39■□□□□ 0.21
CXXC1-209ENST00000587342 GLRX5Q86SX6 157 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 GATAD2AQ86YP4 633 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 CHCHD4Q8N4Q1 142 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 GATA6Q92908 595 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 ISG20Q96AZ6 181 aaKnown RBP16.39■□□□□ 0.21
CXXC1-209ENST00000587342 KCTD15Q96SI1 283 aaPredicted RBP16.39■□□□□ 0.21
CXXC1-209ENST00000587342 ELF4Q99607 663 aaPredicted RBP16.39■□□□□ 0.21
CXXC1-209ENST00000587342 EPAS1Q99814 870 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 ZDHHC6Q9H6R6 413 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 HECAQ9UBI9 543 aaPredicted RBP16.39■□□□□ 0.21
CXXC1-209ENST00000587342 PCSK1NQ9UHG2 260 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 GGT7Q9UJ14 662 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 AP4E1Q9UPM8 1137 aa16.39■□□□□ 0.21
CXXC1-209ENST00000587342 FARP1Q9Y4F1 1045 aaPredicted RBP16.39■□□□□ 0.21
CXXC1-209ENST00000587342 TLR4O00206 839 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 TMCC1O94876 653 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 GSRP00390 522 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 GYPCP04921 128 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 ATXN1LP0C7T5 689 aaKnown RBP16.38■□□□□ 0.21
CXXC1-209ENST00000587342 ADRB3P13945 408 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 MIPP30301 263 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 AIF1P55008 147 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 UBASH3AP57075 661 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 HNRNPDQ14103 355 aaKnown RBP16.38■□□□□ 0.21
CXXC1-209ENST00000587342 TMEM259Q4ZIN3 620 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 PPP1R2P3Q6NXS1 205 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 PRPF39Q86UA1 669 aaKnown RBP16.38■□□□□ 0.21
CXXC1-209ENST00000587342 HORMAD1Q86X24 394 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 UMODL1-AS1Q8N2C9 162 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 ISCUQ9H1K1 167 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 LRRC19Q9H756 370 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 IFNKQ9P0W0 207 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 TPX2Q9ULW0 747 aaKnown RBP16.38■□□□□ 0.21
CXXC1-209ENST00000587342 DMTF1Q9Y222 760 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 ITM2BQ9Y287 266 aa16.38■□□□□ 0.21
CXXC1-209ENST00000587342 SLC31A1O15431 190 aa16.37■□□□□ 0.21
CXXC1-209ENST00000587342 BUB1O43683 1085 aa16.37■□□□□ 0.21
CXXC1-209ENST00000587342 LRCH4O75427 683 aa16.37■□□□□ 0.21
CXXC1-209ENST00000587342 DKK1O94907 266 aa16.37■□□□□ 0.21
CXXC1-209ENST00000587342 IL1R2P27930 398 aa16.37■□□□□ 0.21
CXXC1-209ENST00000587342 EPHA8P29322 1005 aaPredicted RBP16.37■□□□□ 0.21
CXXC1-209ENST00000587342 NEK3P51956 506 aa16.37■□□□□ 0.21
CXXC1-209ENST00000587342 TPI1P60174 286 aa16.37■□□□□ 0.21
CXXC1-209ENST00000587342 SERINC3Q13530 473 aa16.37■□□□□ 0.21
CXXC1-209ENST00000587342 SETMARQ53H47 684 aaPredicted RBP16.37■□□□□ 0.21
CXXC1-209ENST00000587342 UNQ6494/PRO21346Q6UXR6 183 aa16.37■□□□□ 0.21
CXXC1-209ENST00000587342 KDM7AQ6ZMT4 941 aa16.37■□□□□ 0.21
CXXC1-209ENST00000587342 KANSL1Q7Z3B3 1105 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms