RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 UNC5BQ8IZJ1 945 aa20.15■□□□□ 0.82
TRIM47-204ENST00000587339 CENPTQ96BT3 561 aa20.15■□□□□ 0.82
TRIM47-204ENST00000587339 TCEAL4Q96EI5 215 aa20.15■□□□□ 0.82
TRIM47-204ENST00000587339 DPP7Q9UHL4 492 aa20.15■□□□□ 0.82
TRIM47-204ENST00000587339 DENND4CQ5VZ89 1909 aa20.14■□□□□ 0.82
TRIM47-204ENST00000587339 CHD9Q3L8U1 2897 aa20.14■□□□□ 0.82
TRIM47-204ENST00000587339 FAM237BA0A1B0GVD1 139 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 CBX4O00257 560 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 LEFTY2O00292 366 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 GFRA2O00451 464 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 FAM155BO75949 473 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 DDX6P26196 483 aaKnown RBP eCLIP20.14■□□□□ 0.811e-8■■■■■ 66.6
TRIM47-204ENST00000587339 LGSNQ5TDP6 509 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 DENND5AQ6IQ26 1287 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 KDELC1Q6UW63 502 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 ZNF783Q6ZMS7 281 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 RBM23Q86U06 439 aaKnown RBP20.14■□□□□ 0.81
TRIM47-204ENST00000587339 BBS7Q8IWZ6 715 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 C4orf33Q8N1A6 199 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.14■□□□□ 0.81
TRIM47-204ENST00000587339 MZB1Q8WU39 189 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 ZNF669Q96BR6 464 aaPredicted RBP20.14■□□□□ 0.81
TRIM47-204ENST00000587339 CERS2Q96G23 380 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 ACE2Q9BYF1 805 aaPredicted RBP20.14■□□□□ 0.81
TRIM47-204ENST00000587339 SMG9Q9H0W8 520 aaKnown RBP20.14■□□□□ 0.81
TRIM47-204ENST00000587339 CHRAC1Q9NRG0 131 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 UBA2Q9UBT2 640 aaPredicted RBP20.14■□□□□ 0.81
TRIM47-204ENST00000587339 SOX13Q9UN79 622 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 ARHGAP26Q9UNA1 814 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 KRT37O76014 449 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 LUC7L3O95232 432 aaKnown RBP20.14■□□□□ 0.81
TRIM47-204ENST00000587339 MMP2P08253 660 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 KRT4P19013 534 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 GLDCP23378 1020 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 GBP2P32456 591 aaPredicted RBP20.14■□□□□ 0.81
TRIM47-204ENST00000587339 CDH18Q13634 790 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 TEAD2Q15562 447 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 ANKRD20A4Q4UJ75 823 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 ARHGAP15Q53QZ3 475 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 FSCBQ5H9T9 825 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 CMTM8Q8IZV2 173 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 CPXM2Q8N436 756 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 LEMD2Q8NC56 503 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 ARRDC2Q8TBH0 407 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 BHMTQ93088 406 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 FCRL3Q96P31 734 aaPredicted RBP20.14■□□□□ 0.81
TRIM47-204ENST00000587339 SEMA3CQ99985 751 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 SEPT3Q9UH03 358 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 HCFC2Q9Y5Z7 792 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 FAM169AQ9Y6X4 670 aa20.14■□□□□ 0.81
TRIM47-204ENST00000587339 CHD5Q8TDI0 1954 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 RANBP2P49792 3224 aaKnown RBP20.13■□□□□ 0.81
TRIM47-204ENST00000587339 UGT1A9O60656 530 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 RFTN1Q14699 578 aaPredicted RBP20.13■□□□□ 0.81
TRIM47-204ENST00000587339 PCID2Q5JVF3 399 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 CCDC117Q8IWD4 279 aaPredicted RBP20.13■□□□□ 0.81
TRIM47-204ENST00000587339 ANKRD42Q8N9B4 389 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 TDRD5Q8NAT2 981 aaKnown RBP20.13■□□□□ 0.81
TRIM47-204ENST00000587339 DDI1Q8WTU0 396 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 MFSD3Q96ES6 412 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 CERS4Q9HA82 394 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 UGT1A7Q9HAW7 530 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 UGT1A10Q9HAW8 530 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 UGT1A8Q9HAW9 530 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 ZDHHC7Q9NXF8 308 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 YBX2Q9Y2T7 364 aaKnown RBP20.13■□□□□ 0.81
TRIM47-204ENST00000587339 ACTL7AQ9Y615 435 aa20.13■□□□□ 0.81
TRIM47-204ENST00000587339 ZCWPW2A0A1B0GU75 182 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 TTC24A2A3L6 582 aaPredicted RBP20.12■□□□□ 0.81
TRIM47-204ENST00000587339 FAM47DPA6NHR8 397 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 MUSKO15146 869 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 MT-ND3P03897 115 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 MGAT5Q09328 741 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 MPP2Q14168 576 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 POU6F1Q14863 301 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 ZNF697Q5TEC3 545 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 ZNF449Q6P9G9 518 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 POTEHQ6S545 545 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 MGARPQ8TDB4 240 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 SH3RF2Q8TEC5 729 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 ATXN2LQ8WWM7 1075 aaKnown RBP20.12■□□□□ 0.81
TRIM47-204ENST00000587339 PSKH2Q96QS6 385 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 KIFC1Q9BW19 673 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 CINPQ9BW66 212 aaPredicted RBP20.12■□□□□ 0.81
TRIM47-204ENST00000587339 TASP1Q9H6P5 420 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 NKIRAS1Q9NYS0 192 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 ZFATQ9P243 1243 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 SMG5Q9UPR3 1016 aaKnown RBP20.12■□□□□ 0.81
TRIM47-204ENST00000587339 SPAG7O75391 227 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 MOSPD3O75425 235 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 KRT38O76015 456 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 SNRPAP09012 282 aaKnown RBP20.12■□□□□ 0.81
TRIM47-204ENST00000587339 PBX2P40425 430 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 CHRNA4P43681 627 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 SLC5A9Q2M3M2 681 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 ELMSAN1Q6PJG2 1045 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 MARK2Q7KZI7 788 aaKnown RBP20.12■□□□□ 0.81
TRIM47-204ENST00000587339 ZNF771Q7L3S4 317 aaPredicted RBP20.12■□□□□ 0.81
TRIM47-204ENST00000587339 MFN1Q8IWA4 741 aa20.12■□□□□ 0.81
TRIM47-204ENST00000587339 TADA1Q96BN2 335 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms