RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 FAM200BP0CF97 657 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 NCAM1P13591 858 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 GLRBP48167 497 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 PGGT1BP53609 377 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 DAOAP59103 153 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 BEX3Q00994 111 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 SLC12A1Q13621 1099 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 ARL13BQ3SXY8 428 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 UBXN11Q5T124 520 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 KIAA0319Q5VV43 1072 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 WSCD1Q658N2 575 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 NAPEPLDQ6IQ20 393 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 ZFP1Q6P2D0 407 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 ARPINQ7Z6K5 226 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 FSTL5Q8N475 847 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 ZSCAN18Q8TBC5 510 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 RCN3Q96D15 328 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 PGAP3Q96FM1 320 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 COLEC11Q9BWP8 271 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 VCX3AQ9NNX9 186 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 DDIT4Q9NX09 232 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 RUVBL2Q9Y230 463 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 CDYLQ9Y232 598 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 GABRDO14764 452 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 JCHAINP01591 159 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 AHSGP02765 367 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 MYL3P08590 195 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 XRCC1P18887 633 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 RABGGTBP53611 331 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 PGAM4Q8N0Y7 254 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 LSMEM2Q8N112 164 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 KCTD4Q8WVF5 259 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 DPF3Q92784 378 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 SCYL1Q96KG9 808 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 LRGUKQ96M69 825 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 OR12D3Q9UGF7 316 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 BCAP29Q9UHQ4 241 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 SMIM31A0A1B0GVY4 71 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 ANKRD33BA6NCL7 494 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 DNAJA2O60884 412 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 COL6A2P12110 1019 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 DNAJB1P25685 340 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 DNAJB2P25686 324 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 GABRB3P28472 473 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 MRPS22P82650 360 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 NSUN2Q08J23 767 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 PRPSAP1Q14558 356 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 HERC3Q15034 1050 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 RARS2Q5T160 578 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 TMEM198Q66K66 360 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 LINC00523Q86TU6 105 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 CENPLQ8N0S6 344 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 NAT14Q8WUY8 206 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 CATSPER2Q96P56 530 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 RRAGCQ9HB90 399 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 ZBTB26Q9HCK0 441 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 CNGB3Q9NQW8 809 aa17.1■□□□□ 0.33
PRKCSH-205ENST00000587327 CCDC78A2IDD5 438 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 TADA2AO75478 443 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 JUNP05412 331 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 MSX2P35548 267 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 CPT1AP50416 773 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 HUNKP57058 714 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 MS4A2Q01362 244 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 CEACAM7Q14002 265 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 PPP2R5DQ14738 602 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 CNGA3Q16281 694 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 SATL1Q86VE3 508 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 EPB41L1Q9H4G0 881 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 Q9H521 79 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 WDR41Q9HAD4 459 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 EFCAB1Q9HAE3 211 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 CRTAC1Q9NQ79 661 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 NDUFA13Q9P0J0 144 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 ACOT9Q9Y305 439 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 CFLARO15519 480 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 DLX3O60479 287 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 FAM163BP0C2L3 166 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 USP17L7P0C7H9 530 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 AVPR1AP37288 418 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 PKNOX1P55347 436 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 ADGRE1Q14246 886 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 NXNQ6DKJ4 435 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 LRRC8EQ6NSJ5 796 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 GPRIN1Q7Z2K8 1008 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 RASAL3Q86YV0 1011 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 EPAS1Q99814 870 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 SMOQ99835 787 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 WDCPQ9H6R7 721 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 RIMS3Q9UJD0 308 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 RAB26Q9ULW5 256 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 IPPQ9Y573 584 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 SNX10Q9Y5X0 201 aa17.09■□□□□ 0.33
PRKCSH-205ENST00000587327 BPTFQ12830 3046 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 LRIG2O94898 1065 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 F9P00740 461 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 ENO3P13929 434 aaPredicted RBP17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 ETS2P15036 469 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms