RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 IFT43Q96FT9 208 aa19.74■□□□□ 0.75
TRAF4-216ENST00000586813 GPR27Q9NS67 375 aa19.74■□□□□ 0.75
TRAF4-216ENST00000586813 PPARGC1AQ9UBK2 798 aaKnown RBP19.74■□□□□ 0.75
TRAF4-216ENST00000586813 F8VZ95 297 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 PES1O00541 588 aaKnown RBP19.73■□□□□ 0.75
TRAF4-216ENST00000586813 MT-CO3P00414 261 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 MMEP08473 750 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 CKMT1AP12532 417 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 UCHL3P15374 230 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 CCNHP51946 323 aaPredicted RBP19.73■□□□□ 0.75
TRAF4-216ENST00000586813 RPS21P63220 83 aaKnown RBP19.73■□□□□ 0.75
TRAF4-216ENST00000586813 FGL2Q14314 439 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 CARD16Q5EG05 197 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 NAA35Q5VZE5 725 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 KYAT3Q6YP21 454 aaKnown RBP19.73■□□□□ 0.75
TRAF4-216ENST00000586813 KDM7AQ6ZMT4 941 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 Q6ZSR6 202 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 ARCQ7LC44 396 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 TMC6Q7Z403 805 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 CPA5Q8WXQ8 436 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 BMFQ96LC9 184 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 UBL7Q96S82 380 aaPredicted RBP19.73■□□□□ 0.75
TRAF4-216ENST00000586813 HEPHQ9BQS7 1158 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 SLC17A9Q9BYT1 436 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 CLSTN2Q9H4D0 955 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 PRORYQ9H606 182 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 NLGN3Q9NZ94 848 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 FCF1Q9Y324 198 aaKnown RBP19.73■□□□□ 0.75
TRAF4-216ENST00000586813 FADS3Q9Y5Q0 445 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 COL27A1Q8IZC6 1860 aaPredicted RBP19.73■□□□□ 0.75
TRAF4-216ENST00000586813 PTPRQQ9UMZ3 2332 aa19.73■□□□□ 0.75
TRAF4-216ENST00000586813 GCN1Q92616 2671 aaKnown RBP19.72■□□□□ 0.75
TRAF4-216ENST00000586813 ALPPL2P10696 532 aa19.72■□□□□ 0.75
TRAF4-216ENST00000586813 ERCC5P28715 1186 aaPredicted RBP19.72■□□□□ 0.75
TRAF4-216ENST00000586813 L1CAMP32004 1257 aa19.72■□□□□ 0.75
TRAF4-216ENST00000586813 DNA2P51530 1060 aa19.72■□□□□ 0.75
TRAF4-216ENST00000586813 ATP11AP98196 1134 aa19.72■□□□□ 0.75
TRAF4-216ENST00000586813 MAPK8IP2Q13387 824 aaPredicted RBP19.72■□□□□ 0.75
TRAF4-216ENST00000586813 TBC1D25Q3MII6 688 aa19.72■□□□□ 0.75
TRAF4-216ENST00000586813 PARS2Q7L3T8 475 aaKnown RBP19.72■□□□□ 0.75
TRAF4-216ENST00000586813 DCP2Q8IU60 420 aaKnown RBP19.72■□□□□ 0.75
TRAF4-216ENST00000586813 EMC1Q8N766 993 aa19.72■□□□□ 0.75
TRAF4-216ENST00000586813 FGF11Q92914 225 aa19.72■□□□□ 0.75
TRAF4-216ENST00000586813 METTL5Q9NRN9 209 aaKnown RBP19.72■□□□□ 0.75
TRAF4-216ENST00000586813 DNAJC28Q9NX36 388 aa19.72■□□□□ 0.75
TRAF4-216ENST00000586813 ACTL7AQ9Y615 435 aa19.72■□□□□ 0.75
TRAF4-216ENST00000586813 HS3ST3A1Q9Y663 406 aa19.72■□□□□ 0.75
TRAF4-216ENST00000586813 ASXL3Q9C0F0 2248 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 POM121BA6NF01 834 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 NEMP2A6NFY4 417 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 RAD51BO15315 384 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 AP1G1O43747 822 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 ACTN2P35609 894 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 ZNF542PQ5EBM4 170 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 FEM1CQ96JP0 617 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 APOLD1Q96LR9 279 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 STK33Q9BYT3 514 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 TM6SF2Q9BZW4 377 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 ZDHHC6Q9H6R6 413 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 DACH1Q9UI36 760 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 PCDHB1Q9Y5F3 818 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 RAI2Q9Y5P3 530 aa19.71■□□□□ 0.75
TRAF4-216ENST00000586813 LY6G6EA0A0G2JKS1 128 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 CXorf51AA0A1B0GTR3 108 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 SCAMP1O15126 338 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 OPA1O60313 960 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 NEBLO76041 1014 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 CD160O95971 181 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 PAK4O96013 591 aaPredicted RBP19.7■□□□□ 0.74
TRAF4-216ENST00000586813 GP1BAP07359 652 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 MYF5P13349 255 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 ACVRL1P37023 503 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 ETFBP38117 255 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 HNRNPKP61978 463 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■■■□ 24.3
TRAF4-216ENST00000586813 NRG1Q02297 640 aaPredicted RBP19.7■□□□□ 0.74
TRAF4-216ENST00000586813 FZD2Q14332 565 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 CDO1Q16878 200 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 RAB6CQ53S08 254 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 MANEALQ5VSG8 457 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 CDCP2Q5VXM1 449 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 ZSCAN30Q86W11 494 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 PARGQ86W56 976 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 FAM181AQ8N9Y4 354 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 ZNF548Q8NEK5 533 aaPredicted RBP19.7■□□□□ 0.74
TRAF4-216ENST00000586813 OR6K2Q8NGY2 324 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 SLC20A1Q8WUM9 679 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 ISG20Q96AZ6 181 aaKnown RBP19.7■□□□□ 0.74
TRAF4-216ENST00000586813 FCRL3Q96P31 734 aaPredicted RBP19.7■□□□□ 0.74
TRAF4-216ENST00000586813 DUSP23Q9BVJ7 150 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 RAB6CQ9H0N0 254 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 SAMSN1Q9NSI8 373 aaKnown RBP19.7■□□□□ 0.74
TRAF4-216ENST00000586813 NDFIP2Q9NV92 336 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 HECAQ9UBI9 543 aaPredicted RBP19.7■□□□□ 0.74
TRAF4-216ENST00000586813 OR12D3Q9UGF7 316 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 NOCTQ9UK39 431 aaKnown RBP19.7■□□□□ 0.74
TRAF4-216ENST00000586813 U3KQA8 63 aa19.7■□□□□ 0.74
TRAF4-216ENST00000586813 SPTY2D1-AS1A0A0U1RR47 76 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 K7ESM1 405 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 CSF2P04141 144 aa19.69■□□□□ 0.74
TRAF4-216ENST00000586813 NME1P15531 152 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms