RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 PLA2G4BP0C869 781 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 PF4V1P10720 104 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 KCNA5P22460 613 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 CDC25AP30304 524 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 CTNNA1P35221 906 aaKnown RBP5□□□□□ -1.61
ZNF540-204ENST00000586792 MLH1P40692 756 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 STAT6P42226 847 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 PEX3P56589 373 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 SNX16P57768 344 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 MRPS35P82673 323 aaKnown RBP5□□□□□ -1.61
ZNF540-204ENST00000586792 TMPRSS15P98073 1019 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 PLIN5Q00G26 463 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 TRIM14Q14142 442 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 GRM3Q14832 879 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 DCAF4L1Q3SXM0 396 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 TTC31Q49AM3 519 aaPredicted RBP5□□□□□ -1.61
ZNF540-204ENST00000586792 TCEAL5Q5H9L2 206 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 CLLU1OSQ5K130 101 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 ABHD17CQ6PCB6 329 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 CCDC73Q6ZRK6 1079 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 C1orf122Q6ZSJ8 110 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 GPR149Q86SP6 731 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 DDX53Q86TM3 631 aaKnown RBP5□□□□□ -1.61
ZNF540-204ENST00000586792 C11orf74Q86VG3 221 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 NKAIN3Q8N8D7 197 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 C4orf32Q8N8J7 132 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 MRPS27Q92552 414 aaKnown RBP5□□□□□ -1.61
ZNF540-204ENST00000586792 USP7Q93009 1102 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 TBC1D31Q96DN5 1066 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 PABPC5Q96DU9 382 aaKnown RBP5□□□□□ -1.61
ZNF540-204ENST00000586792 BICD1Q96G01 975 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 PDLIM2Q96JY6 352 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 CASD1Q96PB1 797 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 ASB2Q96Q27 587 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 PLIN2Q99541 437 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 TTC1Q99614 292 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 NUDT16L1Q9BRJ7 211 aaKnown RBP5□□□□□ -1.61
ZNF540-204ENST00000586792 TCHPQ9BT92 498 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 MRPL4Q9BYD3 311 aaKnown RBP5□□□□□ -1.61
ZNF540-204ENST00000586792 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 UBE2ZQ9H832 354 aaPredicted RBP5□□□□□ -1.61
ZNF540-204ENST00000586792 MINDY3Q9H8M7 445 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 C17orf75Q9HAS0 396 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 TOPORSQ9NS56 1045 aaPredicted RBP5□□□□□ -1.61
ZNF540-204ENST00000586792 TBC1D13Q9NVG8 400 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 SPG21Q9NZD8 308 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 PRDM4Q9UKN5 801 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 NOX1Q9Y5S8 564 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 TTC3P53804 2025 aa5□□□□□ -1.61
ZNF540-204ENST00000586792 PLXNA4Q9HCM2 1894 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 A0A1B0GUA9 196 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 ACKR2O00590 384 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 MGST3O14880 152 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 B4GALT5O43286 388 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 LY86O95711 162 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 POMCP01189 267 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 ALDH2P05091 517 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 URODP06132 367 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 HARSP12081 509 aaKnown RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 ATF7P17544 494 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 ARF4P18085 180 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 MARCKSP29966 332 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 PBX3P40426 434 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 GRK6P43250 576 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 OR1G1P47890 313 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 NRIP1P48552 1158 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 TFF2Q03403 129 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 SCAPQ12770 1279 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 GRIK3Q13003 919 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 GIT2Q14161 759 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 KARSQ15046 597 aaKnown RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 IL17AQ16552 155 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 ATF7IP2Q5U623 682 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 RRAGBQ5VZM2 374 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 PLPP4Q5VZY2 271 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 CDCA2Q69YH5 1023 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 RINT1Q6NUQ1 792 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 FAM180BQ6P0A1 224 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 DAAM2Q86T65 1068 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 RBM23Q86U06 439 aaKnown RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 GPBP1Q86WP2 473 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 CDR2LQ86X02 465 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 BRSK2Q8IWQ3 736 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 MYCT1Q8N699 235 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 ARL10Q8N8L6 244 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 SYT2Q8N9I0 419 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 ZBTB9Q96C00 473 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 UHRF1Q96T88 793 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 CDCA3Q99618 268 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 TMEM175Q9BSA9 504 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 KIFC3Q9BVG8 833 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 CCDC94Q9BW85 323 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 NXF3Q9H4D5 531 aaKnown RBP4.99□□□□□ -1.61
ZNF540-204ENST00000586792 CWH43Q9H720 699 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 TLE6Q9H808 572 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 PARVGQ9HBI0 331 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 TCF7L1Q9HCS4 588 aa4.99□□□□□ -1.61
ZNF540-204ENST00000586792 TBCCD1Q9NVR7 557 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms